<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01326

Description AGAP006436-PA-like protein
SequenceMCILYVPGCSRCRRGSPPFSSSSSSSSSSSLGRAQQQQQQQQAIVASSSSSAGSLYPSVPSPSTSGGSSSSSATHRHGKPSLPISAANAISSSVGNRGEKSSHHHHHHQYQGGGQAGKDHHGHNHHHHHHHHHRPPRIPFHKRTPQEALFRPGSKPMSLSDAAATAAAAAAALAKAASSTSAPDAQAAPSPGAISSGDSVADPLELADSCLRSNQNCSASGNGGSSAGNAVGNTTPYGGPSSYGRNPMSIGDSHPLPSEGSPASAAPSPMQPSSVSQPTSVPSGDQLITMSPHPPASNNPRSVQPGTPCLDHLDKNTPAPTPTDQHDSKSINASPYHTPSHPGGGSGPGGGTGSGGSGDGGSSQQQQSQQQSQHQQQQNSHQQQQQMSGNSSSSSSNSSTSSNSALGQLKASPRNTLSSGGLKVRSESALGAASGGGVPMTPSINSVFSSAHQTAMANNLASKRESILQMLQSLKRPSLYCKDYETLQSEDIPSTSQLLYDYTALDAWMNHPVKRMRLAAEENRLVKQIRNLDLYANENARALGGFSGPGGINSTTNGMLLKDRGPGNDSSDAHMSSEHGGNGGACDNGASSNAARSGAGGVGGGGGEGPNGTPDRNGTTGPDGALLGEHEIKKEKEDKGGYSLLTDQDLQPSIDGLNQIFDDGGPFNDDPDMHNTPPGSNKSSGGSGGFSEDSKRYPSSHHHSLNSGMPSPKELSQMFPTPPSLDPHPSSSPGGGGCLSDGGXXXXXXXCRCRRPVRAEEPIDDWSFVFLPPTLCTHVGSSKYAPLPNLPSQLAPSALGINPATLVYKSSRQKQKEKAAEREKQKLREQQEREQQQQQQQQQQDQAQQSDSVVLPNAGSGAGGNVSVPGVPGVLGLGLPMLKQETPLTVPQPLSTPNSLLGGLNNLNGSVSHPYSNPPSQGAQSQPHSRPPSVNSLPGGIMGGGAGMLSPSPAGASSAGGLFHPGAPGGRNGSGTGNSVALSANTTPNNCDSLPLTLKVMDLLREQCSVVQSSSNSIHRAVSRYRGPLFGRGAETANVHLLEYVDANDVISLALEHGRLQALKESKMELDHPAGATSSALVRGGTLRGVMNVHKWPFLRAGGPKSNQDIKRIMNSMRPLLQDAFHKRCTTSRLWDAPYTILGPLTWRQFHRLAGRGTGQCEPLPIPSLIVGYEKDWLSLAPYALHYWDKLLLEPYSYPRDVAYVAIVPDNDFVVAKVRTYFKELSTTYEMCKLGRHTPIKGWTAYCASAVSAC
Length1254
PositionMiddle
OrganismAnopheles sinensis (Mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.04
Grand average of hydropathy-0.658
Instability index60.15
Isoelectric point8.45
Molecular weight130166.99
Publications
PubMed=24438588

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01326
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      97.26|      17|      19|      95|     111|       2
---------------------------------------------------------------------------
  123-  139 (24.61/ 8.61)	HNHHHHHHH.HHRPPRIP
  336-  351 (21.30/ 6.07)	Y..HTPSHPgGGSGPGGG
  363-  379 (23.07/ 7.43)	SQQQQSQQQ.SQHQQQQN
  380-  396 (28.27/11.43)	SHQQQQQMS.GNSSSSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     590.05|     149|     799|      35|     218|       3
---------------------------------------------------------------------------
   50-  244 (202.89/69.35)	S.....SAGS.LYPSVPSPSTSGGSSSSSATHRHGKPSL....PISA..ANAISSS...VG..NRGEKS.....SHHH...HHHQ....YQGGGQAGK...DHHGhnhhhhhhhhhrppripfhkRTP......qEALFRP..GSKPMSLSDAAATAAAA....AAALAKAASSTSAPDA.QAAPSPGAISS.GDSVADPLELA..DsCLRsNQnCS........................................ASGnggssagnavgnttpyggpssyG
  245-  312 (76.89/14.81)	R.....NPMS.IGDSHPLPSE..GSPASAAP....SPMQ....PSSV..SQPTSVP...SG..DQLITM.....SPHP...PASN....NPRSVQPGTpclDH....................................................................................................................................................................................
  672-  850 (145.93/48.70)	.............DMHNTPPGSNKSSGGSGGFSEDSKRY....PSSHhhSLNSGMP...SP..KELSQMfptppSLDP...HPSS....SPGGGGCLS...D.GG.......................xxxxxxxCRCRRPvrAEEP..IDD.WSFVFLP....PTLCTHVGSSKYAP.L.PNLPSQLAPSAlG...INPATL..............vykssrqkqkekaaerekqklreqqereqqqqqqqqqqdqAQQ......................S
  851- 1009 (164.34/44.57)	DsvvlpNAGSgAGGNVSVPGVPG.......VLGLGLPMLkqetPLTV..PQPLSTPnslLGglNNLNGS.....VSHPysnPPSQgaqsQPHSRPPSV...N.......................SLP.......GGIMGG..GAGMLSPSPAGASSAGGlfhpGAPGGRNGSGTGNSVAlSANTTP...NN.CDSL..PLTLKvmD.LLR.EQ.CS..................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.70|      10|     799|      33|      42|       4
---------------------------------------------------------------------------
   33-   42 (20.91/11.70)	RAQQQQQQQQ
  828-  837 (18.79/ 9.84)	REQQEREQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.92|      20|      21|     570|     589|       7
---------------------------------------------------------------------------
  570-  589 (38.30/13.53)	SSDAHMSSEH..GGNGGACDNG
  591-  612 (29.62/ 8.81)	SSNAARSGAGgvGGGGGEGPNG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.71|      11|      15|     513|     523|       8
---------------------------------------------------------------------------
  513-  523 (17.68/15.35)	VKRMRLAAEEN
  529-  539 (19.04/17.21)	IRNLDLYANEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.49|      19|      53|     399|     417|       9
---------------------------------------------------------------------------
  399-  417 (30.19/16.15)	STSSNSALGQ.....LKASPR.NTL
  423-  447 (18.80/ 7.02)	KVRSESALGAasgggVPMTPSiNSV
  449-  467 (27.50/13.99)	SSAHQTAMAN.....NLASKR.ESI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.53|      16|      21|     626|     641|      12
---------------------------------------------------------------------------
  626-  641 (26.96/18.43)	LLGEHEIKKEKE......DKGG
  644-  665 (21.57/13.07)	LLTDQDLQPSIDglnqifDDGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.84|      17|     581|     495|     511|      14
---------------------------------------------------------------------------
  495-  511 (31.83/21.81)	TSQLLYDYTALDAW......MN.H
 1050- 1072 (18.81/ 9.68)	VISLALEHGRLQALkeskmeLD.H
 1077- 1094 (23.20/13.77)	TSSALVRGGTLRGV......MNvH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01326 with Med13 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GINSTTNGMLLKDRGPGNDSSDAHMSSEHGGNGGACDNGASSNAARSGAGGVGGGGGEGPNGTPDRNGTTGPDGALLGEHEIKKEKEDKGGYSLLTDQDLQPSIDGLNQIFDDGGPFNDDPDMHNTPPGSNKSSGGSGGFSEDSKRYPSSHHHSLNSGMPSPKELSQMFPTPPSLDPHPSSSPGGGGCLSDGGXX
2) GSPPFSSSSSSSSSSSLGRAQQQQQQQQAIVASSSSSAGSLYPSVPSPSTSGGSSSSSATHRHGKPSLPISAANAISSSVGNRGEKSSHHHHHHQYQGGGQAGKDHHGHNHHHHHHHHHRPPRIPFHKRTPQEALFRPGSKPMSLSDAAATAAAAAAALAKAASSTSAPDAQAAPSPGAISSGDSVADPLELADSCLRSNQNCSASGNGGSSAGNAVGNTTPYGGPSSYGRNPMSIGDSHPLPSEGSPASAAPSPMQPSSVSQPTSVPSGDQLITMSPHPPASNNPRSVQPGTPCLDHLDKNTPAPTPTDQHDSKSINASPYHTPSHPGGGSGPGGGTGSGGSGDGGSSQQQQSQQQSQHQQQQNSHQQQQQMSGNSSSSSSNSSTSSNSALGQLKASPRNTLSSGGLKVRSESALGAASGGGVPMTPSINSVFSSAHQTAM
3) GSSKYAPLPNLPSQLAPSALGINPATLVYKSSRQKQKEKAAEREKQKLREQQEREQQQQQQQQQQDQAQQSDSVVLPNAGSGAGGNVSVPGVPGVLGLGLPMLKQETPLTVPQPLSTPNSLLGGLNNLNGSVSHPYSNPPSQGAQSQPHSRPPSVNSLPGGIMGGGAGMLSPSPAGASSAGGLFHPGAPGGRNGSGTGNSVALSANTTP
551
15
780
745
456
988










Molecular Recognition Features






MoRF SequenceStartStop




NANANA