<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01315

Description AGAP006046-PA-like protein
SequenceMSAELRIVKLFEEVLEDKNIVPSCDEEEQRKRTEEGFKKIGTLFGAMTPEVKEASIRSYLGYVATVHHQNRVHNYLQVMNRMVAMNIIPAKLLCDQLMCSDKLTYKNPCFWIEAFQLIRKVIGGVDYKGVREIMKCCKEKALSFPANVSVNILPQLLELVELIEHIFNRNACLLPAYFIINEIKKTDYQNMHWRVSNLTANFIEEFVSVAQMLSIIGHSSMLPIVEHSSYVDNLIIPWKLDPDTLKLSLRGNLPYDDELLQPQARLLRFVLQQPYSRDMVCSMLNFQKQQKQKCAALEEQLVWLVLNAMEYSEKEGNPGGPNAGGSGMNDHDDVASHTQWIWLHLSSQLIYFVLFQFATFQNIVNTLHEKLAVRNLRRGRDHLMWVFLQYISGSIQKHSILNFLPILKLYDILYPEKEPLPVPDYNNPYCTHQMAPTCIWIHLMKRAQTESYNINRPIPIALRLHFEYLQHLAMPSNNPTLFMGSEYRFALLCNAYSTQTDYFSRPMQALIDTILGNSKNPQAMVSGGVQPLPTAPLSMRVLDSLTIHSKMSLIHSIVMHMIKQAQNKSAIPNGNNMAPALVETYSRLLVYTEIESLGIKGFLGQLLPQVFKSHAWGILYTLLEMFSYRMHHIHSHYRVQLLTHLHSLASVPHTNQMQLHSCVESTALRLIIGLGSVEVQAQLSRYVSEPKPPGNIVSAESEELNRALVLTLARSMHITGTGSDPQSSAWCKDLLQNIMLNTPHAWPQHTLYCFPPVLNEFFMQHNIPKESKQLLKKTVDEEFRNWASMTNENDIIAHFGMAVNPPLFLCLVFKMIIETDAISPVAYKILERIGARALSTHLRKLCDYLLFEVANSGGGAHVNKCVDTINDMIWKYNIVTIDRLVLCLILRTLDGNEAQVSFYIIQLLLLKTTEFRNRVQEFISINSPEHWKQNNWHERHLAFHQKFPEKFAPDESVSHPSLPVYFGNVCLRFLPVLDIIVHRYLEVPTQLSKTLDVILDHLGSLYKFHDRPITYLYNTLHYYERKLRDRPQLKKRLVGTVVGSLESVRPEHWALTEQYEAYMVKKENDNVNWVPELSYYINLVRRMQDTMDGKNVFSGTDWRFNEFPNPPAHALYVTCVELLGLPVGPNVVANSIIDVLVKGYTVVPSPVFHNWVNTIGLIMAALPEAYWSVIYERMQEALNSNAMKEWAFRQSPFEMFNFKVVKEAMLDRSYVTVLAIAHSIFHHFGIGQLATITDSIKEKLKPLVHTEYQLIYLCHVVGPFLNRLSVERARAVSDITLMLYELLEQVDKAQPSAPLRFMDPICDLLYHIKYMFVGDTMKPELEAIIRRLRPALQMRLRFITRLNVDEIGVDQNIANAAQGQSTATTMAGAGSAVAGTVGGGGAVNAPGLGGQQATQGTGGVPMPQQTVGGVVNQNVALQQQLQQQQQMGQGMQAHH
Length1439
PositionTail
OrganismAnopheles sinensis (Mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.09
Grand average of hydropathy-0.092
Instability index44.53
Isoelectric point7.12
Molecular weight164050.22
Publications
PubMed=24438588

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01315
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     386.84|      99|     131|     542|     642|       1
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  422-  492 (89.31/46.35)	..............................V....PDYNNpycthqMAPTCI..WIHLMKRAQTESYNI.............NRPIPIAL..RLH.F..EYLQ...HLAMPSNNPTLFMGSEYRFALL
  542-  642 (167.32/99.54)	LDSLTIHSKMSLIhsIVMHMIK.QAQNKSAI....PNGNN......MAPALVETYSRLLVYTEIESLGIKG.........FLGQLLPQVF..KSHAW..GILY...TLLEMFSYRMHHIHSHYRVQLL
  659-  775 (130.21/71.63)	LHSCVESTALRLI..IGLGSVEvQAQLSRYVsepkPPG.N......IVSAESEELNRALVLTLARSMHITGtgsdpqssaWCKDLLQNIMlnTPHAWpqHTLYcfpPVLNEF.FMQHNIPKESK.QLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     564.36|     188|     749|      93|     300|       2
---------------------------------------------------------------------------
   93-  300 (284.64/283.45)	LCDQLM....CSDKLTYKNPCfwieaFQLIRKVIGGVDYKGVREIMKCCKEKAL.SFPANVSVNILpQLLeLVELIEhiFnRNAclLPAYFIINEIKKTDYQNMHWRVSNLTANFIEEFV...SVAQ.MLSI.IGHSSM..LPIVE...HsSYVDnliIPWKLDpDTLKLSLR..GNL......P..YDDELLQPQARLLRfvlQQP.YSRDMVCSMLNFQKQQKQKCAALEEQ
  845- 1058 (279.72/210.06)	LCDYLLfevaNSGGGAHVNKC.....VDTINDMIWKYNIVTIDRLVLCLILRTLdGNEAQVSFYII.QLL.LLKTTE..F.RNR..VQEFISINSPEHWKQNNWHERHLAFHQKFPEKFApdeSVSHpSLPVyFGNVCLrfLPVLDiivH.RYLE...VPTQLS.KTLDVILDhlGSLykfhdrPitYLYNTLHYYERKLR...DRPqLKKRLVGTVVGSLESVRPEHWALTEQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01315 with Med23 domain of Kingdom Metazoa
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