<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01314

Description AGAP005906-PA-like protein
SequenceMIMDNSKTTSKTTLLKLMLLRAWKERWTDCQWGINVKTVLTRGVSGDVYNLADAIIQQAVVGSGANKLFLSYLKHSLCAHLISHAAVLNRIGKYEHFDKHHCLIALLDFLQSIIEGVTCRSKQEEALLTKAIISLVHWLLQIYECVLQTYAESRALSCEEEEVVQKVAIVLERIAESPFLLGVISIAKCEDPELFLTLQKRFNGINNLTLTTGYVAQVGNASQKNVTVTDYMRKLVQLEVDILEMKLFDGGKVEPITYSMQPLIAIEVLLNPMCDTAMYVAQFINLKRLKGYSFARLYCEIVRGCFISLNNVEGTSKESLMCAFAFIKVPHILRQIHAQVNGKEQKDEATNATYSVEIVEAFEMLLQDSPVLDYMDMKCACNVVECLLKEMAKHNLVTETHVKHFVALREPVTLGLQKLEAANTQLTLMVKFVFRVESPLAGMLKALSADYSKVQDALLAMLCQVLTGNSLDLVLSVASVEGKFKAFISGLLKCNDYAKQATSVEMGKASATRGALFDVTFMILACIAQSYGSDVILAEGGNSFFEKWVRDFMVEKKKTKCPMNMVKQADPMVLEKLIMALNNSDGGDGLKASNLRWEDVCFTIPALLHQVLMLWVNETLSPVDIKKMLDGLKTYFCSFAVCASSWLCAYMHAAGPDEQLKPMNMVQQLCSAPSGPQAEEWQQQDYCKERFGLMGQLIRRMQQEFQRSPQVNPKLRALFPNQLHMVSHLPVEEQFEEAWKAIAERGWLPIETIFLLDTLLQSCGPVWLMEKLIAKLFLCKYIRDLNKTMDIVFAIMHLDIERCTIALLSQIVPKMMLNSKQTPEIVDPQSRVLAKLCVYAIIVTMEVSLTASKKRTRGAATGLDAEDPLDSLCSSAKLRKLDIDGMGVGCEGTGGMGGVFGLDSSLEPVAGFTEQVTPVTPSLKEPLQGCLQTLFRTFTQYISTDELSPKVYFVFQFLSQLVESGRERVMTVLKLVPNGLVQNLLKINATDEMTVGFILRLYDLTTGTGRQFAMSDICLLRNIQMRKDSIKL
Length1032
PositionTail
OrganismAnopheles sinensis (Mosquito)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae> Anophelinae> Anopheles.
Aromaticity0.08
Grand average of hydropathy0.125
Instability index40.26
Isoelectric point6.43
Molecular weight115479.19
Publications
PubMed=24438588

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01314
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     322.94|      98|     230|     450|     552|       3
---------------------------------------------------------------------------
  450-  552 (153.22/106.32)	DYSKVQDALLAMLCQVLTGnslDLVLSvASVEGKFKA.FISGLLKCNDYAKQATSVEMGKASATRGALFDVTFMILACIAQSYGSdVILAEG..GNSFFEKWVRDF
  685-  785 (169.72/102.38)	DYCKERFGLMGQLIRRMQQ...EFQRS.PQVNPKLRAlFPNQLHMVSHLPVEEQFEEAWKAIAERGWLPIETIFLLDTLLQSCGP.VWLMEKliAKLFLCKYIRDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.60|      13|      39|     588|     601|       4
---------------------------------------------------------------------------
  588-  601 (21.13/16.97)	DGLKASNLRWEdVC
  630-  642 (26.47/16.04)	DGLKTYFCSFA.VC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     171.06|      43|     290|     115|     157|       6
---------------------------------------------------------------------------
  115-  157 (70.52/41.35)	EGVTCRSKQEEALLTKA.....IISLVHWLLQ...............IYECVLQTYAESRALS
  340-  398 (40.63/20.99)	..VNGKEQKDEA..TNAtysveIVEAFEMLLQdspvldymdmkcacnVVECLLKEMAKHNLVT
  410-  448 (59.92/34.13)	EPVTLGLQKLEAANTQL.....TL.MVKFVFR...............V.ESPLAGML..KALS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01314 with Med24 domain of Kingdom Metazoa
Unable to open file!