<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01234

Description BnaAnng16890D protein
SequenceMMKSGEKREEIITLAIDRDKESQNALKWTVDNLVSKGQTLTLLHVKLKQFPSLPYSGSYPNRSGDDGTELFLPFRCYCARKDVLCQDVIVEDISAAKGILDYVQKNAIETLVLGASKMNLLRFKAADVSNTVMKRAPSFCTVYSISKGKISSMKSATSSLPNSTMRSNMNVERRQHTMHRIHDEIQIEIKSPFMRRGYEGRYQPSMTDSDISFVSSGRPSVDLMFPSFDDHIEVPRLSVNSDYEENRISFATSSSSDKQSIDLGSSYTAFSSSSGRPSCSLSTQDEIEAEMRKLKMELKHTMDMYNSACKEAISAKKAATELHKWKADKERKLEEVRLSKEEAMAMAESEKEKSRVAIETAVAAHRIAELEAQKTKHIIEENNKSVVKTTDLRYRKYIIEEIEEATEDFSPSRKIGEGGYGPVYKGTLDFTQVAIKVLRPDAAQGRSQFQQEVEVLTSMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGNSPALSWQLRFRIAAEIATGLHFLHQMKPEPLVHRDLKPGNILLDQHYVSKISDVGLARLVPPSVADTATQYRMTSTAGTFCYIDPEYQKTGMLGTKSDIYSFGIMLLQILTAKPPMGLTYHVERAIENRTFAEMLDPSVPDWPLEEALVAAKLAVQCAELRRKDRPDLGNVVLPELNRLKTLAEESMLPTNIGGSKRPTRNRNNNIYIKSPLSTTSLHEIMSGPQLHYASDTPSIHKKIAS
Length737
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.441
Instability index52.96
Isoelectric point7.88
Molecular weight82737.63
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01234
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.31|      16|      57|     215|     233|       1
---------------------------------------------------------------------------
  215-  233 (26.71/22.64)	SSGRPSVDLmfpSFDDHIE
  273-  288 (30.60/16.78)	SSGRPSCSL...STQDEIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      82.81|      18|      18|     341|     358|       2
---------------------------------------------------------------------------
  299-  313 (16.51/ 8.65)	KHTMD...MYNSAcK..E....AI
  321-  340 (19.11/11.29)	ELHKW...KADKE.RklEEVRLSK
  341-  358 (28.56/20.86)	EEAMA...MAESE.K..EKSRVAI
  359-  379 (18.63/10.80)	ETAVAahrIAELE.A..QKTKHII
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.26|      13|     217|     191|     204|       3
---------------------------------------------------------------------------
  191-  204 (23.52/22.04)	SPFMRRGyEGRYQP
  410-  422 (26.74/18.35)	SPSRKIG.EGGYGP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01234 with Med32 domain of Kingdom Viridiplantae
Unable to open file!