<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01210

Description BnaC03g74370D protein
SequenceMVGSERRDERVVVAIDRGKGSQAALKWAVDNLVTSGESLTLVHVKLKQALVINANPNKYSDDVKELFLPFRCFCNRKDIRCEDAVLEDVDAAKGIIGYVKENAIDILVLGASKMTLLKRFKAADVTSTVMKGAANFCTVYAISGSKISSVRSATSSPPPLCAIRPQITARPSNNSMGQRETQDEIEIKYKSQRGFDQASVTDSDISFVSSDRRSVDIMFPTPSRLAIYSEFEDNRSSFATSSCSSEKQSVDLGSSYSAFSPSSQESGRLSTWWSLQDDVQAEMKRLKMELRYTMEMYSTACKEAITAKNMSKELHKWRVEKEHKLEEARQAKEAAMAMAENEKAKTRAAMEAIATANRIAEIEAKKRKQIETASLRKAEDKNTSDRRYREYTIEEIEEATENFSINNKIGEGGYGPVYEGTLDYTKVAIKVLRPDARQGRSQFQQEVEVLTSIRHPNLVLLLGACAEYGCLVYEHLENGSVEDLLLKRGNNSPVLLTWQLRFRIAAEIATSLNFLHHMKPEPVVHRDLKPANVLLDQHMVSKIADVGLARLVPPSVSDAVTQYRVTSAAGTLCYIDPEYQQTGMLGTKSDVYSFGITLLQILTGKPPMSLTHQVQKAIEGGTFAEMLDPDVHDWPLEEALVLAKIGLRCAELRRKDRPNLGKDVLPELKRLMDLAEESMSIVRSE
Length685
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.377
Instability index45.84
Isoelectric point6.49
Molecular weight76416.29
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01210
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.06|      11|      32|     206|     216|       1
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  206-  216 (19.75/11.54)	SFVSSDRRSVD
  241-  251 (20.31/12.06)	SSCSSEKQSVD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.73|      25|      28|     295|     322|       2
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  295-  322 (33.75/32.74)	EMYSTAcKEAITAknMSK.ELHKWRVEKE
  326-  351 (34.98/21.03)	EEARQA.KEAAMA..MAEnEKAKTRAAME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.76|      54|     395|     111|     166|       3
---------------------------------------------------------------------------
  111-  166 (87.79/61.18)	ASKMTLLKRFKAADVTSTVMKGAANFCTVYAIsgSKISSVRSATSSPP................PLCAIRPQ
  509-  578 (85.97/53.82)	ATSLNFLHHMKPEPVVHRDLKPANVLLDQHMV..SKIADVGLARLVPPsvsdavtqyrvtsaagTLCYIDPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.19|      15|     382|     275|     290|       4
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  275-  290 (22.97/20.78)	LQDDVQAEMKRLkMEL
  660-  674 (27.22/19.10)	LGKDVLPELKRL.MDL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01210 with Med32 domain of Kingdom Viridiplantae
Unable to open file!