<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01205

Description BnaA09g56190D protein
SequenceMWLPKTDATSKGKKSGSVAVAIDNDKTSKIALKWTLENLTTRGQTLALIHVAPKSQSSSDIEDGTMHMQHMDKQTKDLFVSFHCYCSRKEIQCLDVLLEDVDKVKAIVEYVTISAIENLVLGAPSRSSFMRRFKTDLPTSVSKAAPDFCNVYVISKGKVSSLRSSSRPAPYHPSVLSDFDFENKPKIANTPASPRARRSVDKRFTKPPQGHMKLIGDFSDSESEYSFISASHQGSENSFISSGTPSSADRCSFSYDLPDSARTSRMSTSSEQSIGSHRLGIKFTDLGFLNNSSTVSEESGRTSCSYSSQSLDDVESQMRRLRLELKQTMDMYSSACKEALTARQEATELKNLRSEEERRMEELKMTEETAMSMVANERAKVKTAMEAAEAANRLAEAEAKRRLNAEMKVLKESDSFSGQSIVRYRKYTVHEIEEGTDNFAESRKVGEGGYGPVFRGHLDHTSVAVKVLRPDAAQGRSQFHKEVEVLSCIRHPNMVLLLGACPEYGILVYEYMARGSLDDRLFRRGNTPPISWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNVLLDQNYVSKISDVGLARLVPAVAENVTHYRVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLLTAKQPMGLAYYVEQAIEEGKFKDMLDSEVPDWPYEEALCLAKLSLQCAELRRKDRPDLGKEVMPELNRLREMGEESLESVFFAGHGRMPHSSQVSYTSEGRSAPYISNPGSSISNS
Length751
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.466
Instability index52.13
Isoelectric point6.68
Molecular weight83693.82
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01205
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.48|      42|      42|     355|     396|       1
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  355-  396 (67.23/49.19)	EEERRME.ELKMTEET.AMSMVANERAKVKTAMEAAEAANRLAE
  398-  441 (58.25/41.59)	EAKRRLNaEMKVLKESdSFSGQSIVRYRKYTVHEIEEGTDNFAE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     279.95|      89|     252|       3|      97|       2
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    3-   97 (142.09/111.05)	LPKTDATSKGKKSGSVAVAidndkTSKIALKWT....LENLTTRGQTLALIHVAPKSQSSSDIEDGTMHMQHMDKQTKDLFVSfHC...YCSRKEIQCLDVL
  257-  352 (137.86/92.07)	LPDSARTSRMSTSSEQSIG.....SHRLGIKFTdlgfLNNSSTVSEESGRTSCSYSSQSLDDVESQMRRLRLELKQTMDMYSS.ACkeaLTARQEATELKNL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.18|      33|     520|     132|     168|       4
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  132-  168 (53.23/50.99)	RFKTDLPTSVskaaPDFCNVYVISKGKVS....SLRSSSRP
  655-  691 (54.95/41.74)	KFKDMLDSEV....PDWPYEEALCLAKLSlqcaELRRKDRP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01205 with Med32 domain of Kingdom Viridiplantae
Unable to open file!