<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01170

Description BnaA06g11260D protein
SequenceMWLPKTDATCKGTLSGSVAVAIDKDKTSQNAIKWTMENLTSRGQTLALIHVAPKSQSSSDIEDGTMHMQQMDKQTKDLFVSFHCYCSRKEIHCLDVLLEDADKVKAIVEYVTVSAIENLVLGAPSRSSFMRRFKTDLPTSVSKAAPDFCNVYVISKGKISSLRSSSRPAPYKSTVLSDFENQETAASEKKHKPANTTPITRARRSVDSDGPRPGFVKLPQGNMKMIGDFSDSGSEFSFISASQQGSENSFISSGTPTSGDRCSFTYDLPDSARTSRMSTSSEQSIGSHRLGIKFTDLGFLNNSSTASEESGRTSCSYSSQSLDDVEAQMRRLRLELKQTMDMYSSACREALTARQEATELKNLRSEEGRRMEELKMTEETAISMIENEKAKAKTAMEAAEAANRLAEAEAKRRLTAEMKALKESDSPTRYTMVRYRKYTVHEIEEGTDNFAESRKVGEGGYGPVYRGHLDHTSVAVKVLRPDAAQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGILVYEYMAKGSLDDRLFRRGNTPPISWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNVLLDHNYVSKISDVGLARLVPAVAENVTQYRVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLLTAKQPMGLAYYVEQAIEEGKLKDMLDPAVPDWPLEEAMSLAKLSLQCAELRRKDRPDLGKEVMPELNRLRELGAESLESVFYAGHGPFSHSSQVSYTSEGRSAPSISNPGSYISNP
Length762
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.467
Instability index50.51
Isoelectric point6.61
Molecular weight84373.55
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01170
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.10|      33|     133|     508|     545|       1
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  508-  545 (56.05/49.70)	LLGACPEYGILVY..EYMAKGSLDDRLfrrgnTPPI.SWQL
  645-  680 (51.05/32.91)	LLTAKQPMGLAYYveQAIEEGKLKDML.....DPAVpDWPL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     278.09|      89|     263|       3|      97|       4
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    3-   97 (140.45/104.82)	LPKTDATCKgtLSGSVAVAIDKDKTsqnAIKWT....MENLTSRGQTLALIHVAPKSQSSSDIEDGTMHMQQMDKQTKDLFVSfHC...YCSRKEIHCLDVL
  268-  363 (137.64/85.38)	LPDSARTSR..MSTSSEQSIGSHRL...GIKFTdlgfLNNSSTASEESGRTSCSYSSQSLDDVEAQMRRLRLELKQTMDMYSS.ACreaLTARQEATELKNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.63|      20|      21|     379|     398|       5
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  379-  398 (32.37/25.52)	ETAISMIENEKAKAKTA.MEA
  400-  420 (27.26/20.24)	EAANRLAEAEAKRRLTAeMKA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01170 with Med32 domain of Kingdom Viridiplantae
Unable to open file!