<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01157

Description BnaC05g31890D protein
SequenceMKSQKVKVKKKKKNVNSGLVAVAVDKDKGSQHALKWAADRLVSKGDTIILLHVIHRSSSDSVEVTAEKHKQTDNLFVTFHCYCSRKEIQCLDVTLEDDSIVKSLAEYVSSGVIENLVLGAPSRHGFMRKFKMSDTPSNVAKAAPDFCTVYIISKGKISSVRHARRDAPYQSPLIAQIENHSALTNYEKFRNTMSFRDRTPARSSVSSSVEDFGKSPLARTSNNANSFYDLSDSDNNDISFVSSGRPSITSSGRRSITSSERPSTSTNGRSDISFVSSGRPSTSTTGSPSFIYEFPDSGLTPRMSTGSGQSVGSMRLGINIQHDFSFVSQDSGRSSCSCSPQNLEDVEAEMRRLKLELKHTIDLYGSACREALAAKQEAKELQRQKMEEEGWGQEGQLSEKSTKLIAEKERANKAAMDASETANKIADLETQRRAIESGDAFSDSNLRYRRYVIGEIEEATNSFDKANKIGEGGYGPVFKGHLDHTPVAIKVLRPDAAQGRSQFQREVEVLSCIRHPHMVLLIGACPEYGVLVYEYMAKGSLADRLYRNGNTPPLSWELRFRIAAEVATGLLFLHQTKPEPIVHRDLKPGNILIDQNYVSKIGDVGLARLVPAVAENVTQCHVTSTAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLELLTAKKPTGLSYTVEQAIQKGTFKDMLDPAVLNWPVEEALSLAKVALKCAQLRRKDRPDLGKEVLPELNRLRALADANMEWIMFNYSRGPSPRHSLISLPTVDEMSVTSDGSNTHSSTLSDMEKNLGALLL
Length788
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.423
Instability index44.94
Isoelectric point8.39
Molecular weight86901.29
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01157
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     163.09|      30|      31|     237|     266|       1
---------------------------------------------------------------------------
  193-  220 (35.41/14.03)	.MSF..RDRTPARSSVSSSV.....EDfGKSPLART
  237-  266 (52.97/24.07)	DISFVSSGRPSITSSGRRSI.....TS.SERPSTST
  271-  305 (49.03/21.82)	DISFVSSGRPSTSTTGSPSFiyefpDS.GLTPRMST
  323-  339 (25.69/ 8.48)	DFSFVSQD..SGRSSCSCS.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.94|      10|      22|     436|     445|       3
---------------------------------------------------------------------------
  436-  445 (17.18/10.83)	ESGDAFSDSN
  458-  467 (16.77/10.39)	EATNSFDKAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.55|      10|     502|      38|      47|       4
---------------------------------------------------------------------------
   38-   47 (18.06/ 9.03)	ADRLVSKGDT
  542-  551 (19.49/10.21)	ADRLYRNGNT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01157 with Med32 domain of Kingdom Viridiplantae
Unable to open file!