<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01152
Description |
BnaA07g10060D protein |
Sequence | MDQSQQRTVTAPSSSRSYQFHPARAKIIDLFNLYLGRGSRQKPDEPARDPPPNKSQKRVHAPSRDFPPGNEQFIVDFEQLHTQFNDPDQLRAITESVSVTMVLQCSNHAPRAEFLLFALRALFRIGFVNWDTFLPSLLSSVSAAESSLNQAASSSSATSSQSLAPVGIGSPGNEQASLTPLAVRSSQRVRAAAVNSLRQISCKIILIGVEFNLKPVTHAEIFQHMMSWLVSWDMREMGTEKSLSEWLRSCLEVIWLLVDEGQSRIPFYELLRSGLQFLENIPDGDEALFTLVMEIHRRRDAMAMHMLMLDQHLHCPTFGTHRISSQTPANVSAEAVAHLRYSPITYPSVLGEPLCGEDLAMSIPQGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVSPGYRPSAQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSGNVFFYANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGDDNHILRTNHVTWLLAQIIRVELVMTALNSDLKKVETTRKILSFHREDRTDPNNPQSVLLDFVSSCQNLRIWSLSATTRAYLNNDQLLKGKQIDEWWRSKGERMMDYMNLDDRSIGMFWVVSYTMAQPACETVINWLSSSGMAELPGLQPNERVMMMQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFTQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKAKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSEKTLRHFPSLLRDALSGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPSYVMTYLSHSFPQHRQYLCAGACMLMQGHPDKVNSANLARVLREVSPEEVTANIYTLVDVLLHKVHVDLQRGHNIKEILDKHDANLAFFFWTHEMLPLDIFILALIDRDDDPHALIIAKIILERPELMQRINMYCANRGPPEHWLFTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNAMDTADKILTAYSHFLAYHPLRFTFVRDILAYFYGHLPGQLVVKILRVLGLSKIPFSESFPQYISNPSSPTCPPLDYFATLLLNLVNNVIPPLSSSSSNCSSRSGSMADMLNSSSARSLHGKTPGASQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCMNTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHTQLYMEASRVVRETWWLTDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTHLIIKNLRPVTSVAMLRVVFRIMGPLLPRLANTHALFNKTLALLLTTMVDVFGKNSQTQVPVEASQIADLIDFLHHVVHYEGQGGAVQSSSKPRPDILALIGRAADSLRPDVQHLLSHLRTDPNTSIYAAAHQNAAKTNTS |
Length | 1557 |
Position | Tail |
Organism | Brassica napus (Rape) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.051 |
Instability index | 45.00 |
Isoelectric point | 7.06 |
Molecular weight | 174261.47 |
Publications | PubMed=25146293
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
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GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP01152
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 347.48| 86| 548| 427| 512| 1
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427- 512 (149.87/87.27) IVELLKLTNSGNVFFYANCWQEWLVFSDIFFF.LIKS..GCTDFVDFIDKLVL.......RLN......GD......DNHILRTNHVTWLLAQIIRVELVMTALNSDL
961- 1049 (112.06/63.46) IKEILDKHDANLAFFF...WTHEMLPLDIFILaLIDR..DDDPHALIIAKIILerpelmqRINmycanrGP......PE......H..WLFTQVFKRNELQKALGNHL
1397- 1467 (85.54/46.76) IVALLHA.......FFSNLPQEWL...DGTHL.IIKNlrPVTSVA..MLRVVF.......RIM......GPllprlaNTHALFNKTLALLLTTMVDV...........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.46| 25| 548| 933| 958| 2
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933- 958 (40.01/34.07) PEEvTANIYTLVDVLLHKVHVDLQRG
1477- 1501 (46.45/34.56) PVE.ASQIADLIDFLHHVVHYEGQGG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.51| 27| 102| 44| 72| 3
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44- 72 (48.37/41.00) DEPARDPPPNKSQKrvHAPSRDFPPGNEQ
149- 175 (46.14/31.83) NQAASSSSATSSQS..LAPVGIGSPGNEQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.34| 26| 548| 114| 139| 4
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114- 139 (46.17/32.09) FLLFALRALFRIGFVNWDTFLPSLLS
685- 710 (45.17/31.22) LLLISPHSMFRSHFTQLAQRNASLLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 111.29| 24| 328| 223| 249| 6
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226- 249 (46.05/37.01) MSWLVSWDMREMGTEK.SLSEWLRS
253- 273 (22.79/10.24) ....VIWLLVDEGQSRiPFYELLRS
597- 619 (42.44/23.75) MFWVVSYTMAQPACE..TVINWLSS
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