<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01138

Description BnaC04g36480D protein
SequenceMWLAKNNSVGIKEGGSTGVVAVAIDKEKSSQHALKWAVDHLLQRGQSVILVHVKLRPSPLNNTSSLHASSAKLTQEPSLVCRDPEGASKDIFLPFRCFCTRKDIQCQDVLIEEYDVAKALVEYANQAAIEVLVVGSSNKGGFLRFNKPTDIPVAITKTAPDFCTVYVISKGKISTMRSASRSAPTNAPLRSPIQPPSLRPPQPVPSTSNNMRADRQSFESQRRSMEDRRSVEDRRSVEDQSDSFSKNPIFCDFGGKPRRLPFISCVFIYTFILITHRHETETPLDENRSPFTRRGYGRSYGDLSVPESDISFVSSGRPSIDRMFPNINDMNDPNRTPPRLSNFSDMDYGPNFESSSNYGRRSVDVNSPTDLSSGSFENERFSSASAMQDDVESEMRRLKLELKQTMEMYSTACKEALTAKQKATELQRWKLEEERKLEEARLAEEAALAIAEKEKARSKAAMEAAEAAQRIAELESKKRVNAEMKALKESEEKTKALTALANNDVRYRKYSIEEIESATEFFAEKYKIGEGGYGPVYKCYLDHTPVAVKVLRADAAQGRSQFQQEVEVLSSIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRLGNSPPLSWQMRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHYVERALEKGTLSDLLDPAVTDWPVEDTAEFAKLALQCAELRRKDRPDLAKVILPELNRLRTLADESQLVSQ
Length800
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.07
Grand average of hydropathy-0.443
Instability index54.91
Isoelectric point6.87
Molecular weight89489.75
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01138
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     162.07|      48|      49|     415|     463|       1
---------------------------------------------------------------------------
  369-  407 (39.65/18.13)	..........TDLSSGSFENER.FSSASAMQDD....VESEmrrlKLELKQTME
  415-  463 (68.16/39.14)	EALTAKQK.ATELQRWKLEEERkLEEARLAEEAALAIAEKE....KARSKAAME
  472-  513 (54.27/27.04)	AELESKKRvNAEMKALKESEEK........TKALTALANND....VRYRKYSIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.29|      21|      49|     285|     308|       2
---------------------------------------------------------------------------
  285-  305 (41.59/24.96)	DENRSP.....FTRRGYGRS......YGDLSV
  332-  363 (31.69/11.20)	DPNRTPprlsnFSDMDYGPNfesssnYGRRSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.96|      27|      49|     577|     605|       3
---------------------------------------------------------------------------
  577-  605 (45.52/41.59)	MVLLLGACPEcgCLVYEFMANGS.LEDRLF
  629-  656 (45.44/32.45)	LLFLHQAKPE..PLVHRDLKPGNiLLDRNF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01138 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RSASRSAPTNAPLRSPIQPPSLRPPQPVPSTSNNMRADRQSFESQRRSMEDRRSVEDRRSVED
2) SSSNYGRRSVDVNSPTDLSSGSFENERFSSASAMQDD
177
354
239
390










Molecular Recognition Features






MoRF SequenceStartStop




NANANA