<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01112
Description |
BnaC04g12140D protein |
Sequence | MDAGEARMTPGACLWMHRKLKMFLVSIAAALILHHVGLHVNLSFEVEKLRAELRHVQEMYTAAQTETFDASRKLAELNQRRLEEAIKLEELKLKEYEARELAEKEKQNFEKARRDAESMRERAEREIAQRREAERKAARDAKEKEKLEDTLGSPRLQYQHFTWEEIVAATSSFSEELKIGMGAYGSVYKCNMHHTTAAVKVLHTAESGLSKQFQQELEILSKIRHPHLVLLLGACPEQGALVYEYMENGSLEDRLFQANNSPPLPWFERVRIAWEVAAALIFLHKSKPKPIIHCDLKPANILLDHNFVSKVEDVGLSTMVQVDPLSTKFTIYKQTSPVGTLSYMDPEYQRTGMISSKSDVYSFGMIVLQLLTAKPPMALTHLVESAMDSNDEFLKILDQKAGNWPVEETRELTSLALCCTELRGKDRLDLRDQILPALESLKKVAEKARNSISSVPTQPPFHFLCPLLKDVMNEPCVAADGYTYDRRAIEEWFEEHNTSPMTDSPLLSKNLLPNYTLYTAIMEWRSRLK |
Length | 529 |
Position | Tail |
Organism | Brassica napus (Rape) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.400 |
Instability index | 44.77 |
Isoelectric point | 6.15 |
Molecular weight | 60474.83 |
Publications | PubMed=25146293
|
Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
|
GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-UniRule
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP01112
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 123.99| 42| 49| 349| 395| 1
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349- 395 (59.92/49.86) QRTG..MISSKSDVYSFGMIVLQlLTAKPPMALTHLVESAMDSndefLK
399- 442 (64.08/39.00) QKAGnwPVEETRELTSLALCCTE.LRGKDRLDLRDQILPALES....LK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 80.45| 23| 23| 94| 116| 2
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68- 89 (20.88/10.07) ..FDAsRKLAELNQRRLEEAIKLE
94- 116 (38.38/24.46) KEYEA.RELAEKEKQNFEKARRDA
120- 133 (21.19/10.32) RERAE.REIAQ.........RREA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.36| 27| 168| 28| 55| 3
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28- 55 (41.10/30.04) AAALILH..HVGLHVNLSFEVEKLrAELRH
197- 225 (40.26/24.60) AAVKVLHtaESGLSKQFQQELEIL.SKIRH
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