<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01111

Description BnaA03g51380D protein
SequenceMARNRKDKDGGFGTDGLVAVAIDKDKSSQNALKWAVDNLLQKGQTILLVHVKPRASSVSTNPSTNPNSSKTSQANGDSSVVTVEPDGSYKQLFLPFRCLCSRKEIQCKDVLLEDSDVGKALVEYANQVIIEVLVVGASSKGGFLRFNKPTDIPVIITKNAPDFCTVYVITKGKLSTKRAASRAAPSVSPLLIEIQQNSSRPQYPRLPSPATTNTRAAERQSFESQRRSLDDQSESSRPPFTRRGLNGRSSYGDLSIPDPDISLFSSGRPSTDRHSLSLFDNSDQNRTPPPRLSNFSDIDNGSFESMNYGQGSMDISSPPASSRDSFENERFSSAEPGGEDVEAEMRRLKLELKQTMEMYSSACKEALTSKRKATELQRWKLEEERKYEEAKQAEEAALAIAEKEKAKSKAALEAAEAAQRIAEMESKKRISAEMKALKETEEKKKAVDALANADVRYRKYSIEEIEDATEYFDEKYKIGEGGYGPVYKCYLDQTPVAVKALHTDAAQGRSQFKQEVEVLSCMRHPHMVLLLGACPEGGCLVYEFMSNGSLEDRLFQQGDSPPLSWQTRFRIAAEIGTVLLYLHQTKPEPLVHRDLKPANILLDRNFVSKVADVGLARLVPPSVANTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMYLQMITGKPPMGLTRYIESALEKGNLKDVLDPSVSDWPVEDTTEFAKLALKCAEIRRKDRPDLSKIILPELNRLRALAEESSRSAVVINSPGPSPTVSQTSSPKL
Length769
PositionTail
OrganismBrassica napus (Rape)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.534
Instability index51.61
Isoelectric point7.05
Molecular weight85079.27
Publications
PubMed=25146293

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01111
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.84|      28|      35|     178|     205|       1
---------------------------------------------------------------------------
  149-  165 (22.05/ 9.03)	.......PTDIPVI..ITKNA..PDFCT
  178-  205 (48.29/28.35)	RAASRAAPSVSPLLIEIQQNSSRPQYPR
  215-  242 (46.50/27.03)	RAAERQSFESQRRSLDDQSESSRPPFTR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.25|      23|      28|     327|     354|       2
---------------------------------------------------------------------------
  327-  351 (35.86/35.70)	EneRFSSA..EPGGEDVEA.EMRRLKLE
  357-  382 (31.38/15.32)	E..MYSSAckEALTSKRKAtELQRWKLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.28|      14|      15|     266|     279|       3
---------------------------------------------------------------------------
  266-  279 (25.53/12.34)	SGRPSTDRHSLSLF
  282-  295 (24.75/11.76)	SDQNRTPPPRLSNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      85.93|      15|      15|     414|     428|       5
---------------------------------------------------------------------------
  393-  407 (22.79/14.02)	AEEAALAIAEKEKAK
  414-  428 (24.13/15.25)	AAEAAQRIAEMESKK
  432-  444 (19.16/10.68)	AEMKA..LKETEEKK
  445-  459 (19.85/11.32)	KAVDALANADVRYRK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01111 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QNSSRPQYPRLPSPATTNTRAAERQSFESQRRSLDDQSESSRPPFTRRGLNGRSSYGDLSIPDPDISLFSSGRPSTDRHSLSLFDNSDQNRTPPPRLSNFSDIDNGSFESMNYGQGSMDISSPPASSRDSFENERFSSAEPGGEDVEAEMRRLKL
196
350










Molecular Recognition Features






MoRF SequenceStartStop




NANANA