<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01079

Description WD40 repeat-like protein
SequenceMVSFEDEDPIEGSGEEEEDEDENMDDNDNDNDNDNDEGEDQEEGEGEEEGDEDDNDQDDDGDQDDDEEGDNDNDQDSPSQSRRQSRASPSTSRPPNPTVMLTSPSPRPSAHQSPSMHLPWPSVRQEAINAVTYDIVPTMAAPQSTSINAVAATPDMRWVFSGGSDGYIRMYNWVETANGKVPLTVAQKHPFVDSVMKAGSLTTYWENEETSVRTPPAQSAEEPKDSSPVYSLATQHQATWLLSGLESGAINLQTCRHQAGTKITTLREHTSAVSVLSLAQDEYSFLSGSWDKTILDWDLNMGKVKRSFVGSGGQISALERRPESSIPVPHVAEDTQIPSSTFSSNNAAKPLTNGTSAPEERRGSKNSQNGTEDAAGSPDGSLFGDDNGSLFGDDNINADNTNNNNAFDDDDDFAKAIATGLQQQGQEDTEMMDAGGPVQPPEDTIVPQDPTDSTAQPQQDTSMQDEDQQDPLTTGNPHAEEITTNGHNEETSDSSDPPQTSSSTFLDASIDGTLRIWDQRMSQPIAIMHPPSGVPPWCMGACWSVDGNSIYAGRRNGTVEEYSLHKGLTMAQPQRTFRFPSGSGAVSAVRAMPNGRHLICASYDILRLYDLRDVENTRSTVPFLIVPGHRTGVISALHIDPACRFMISTAGNRGWEGVGTEVLLGYEIGCLEREK
Length675
PositionKinase
OrganismAureobasidium pullulans EXF-150
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Dothideomycetidae> Dothideales> Saccotheciaceae> Aureobasidium.
Aromaticity0.05
Grand average of hydropathy-0.834
Instability index63.20
Isoelectric point4.19
Molecular weight73312.05
Publications
PubMed=24984952

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01079
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.57|      22|      23|      15|      37|       1
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    8-   32 (34.84/16.69)	DPIEgsgEEEEDEDENMDDNDNDND
   34-   58 (34.74/12.34)	DNDEgedQEEGEGEEEGDEDDNDQD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     170.73|      38|      39|     421|     458|       2
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   90-  114 (36.79/15.42)	.STSRPP.......................NPTVMLTSPSPRPSA.....HQSP.
  421-  451 (47.13/21.87)	........................LQQQGQEDTEMMDAGGPVQPPEDTIVPQDPT
  452-  491 (55.69/27.21)	DSTAQPQ.............qdtsMQDEDQQDP..LTTGNPHAEEITTNGHNEET
  493-  536 (31.13/11.89)	DSSDPPQtssstfldasidgtlriWDQRMSQPIAIMHPPSGVPP...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     136.02|      36|      38|     316|     351|       3
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  267-  294 (37.16/14.32)	....REHTSAVSVLSLAQDE.Y.....SFLSGSWDKTI
  316-  351 (60.80/27.24)	SALERRPESSIPVPHVAEDT.QIP.SSTFSSNNAAKPL
  356-  387 (38.06/14.82)	SAPEERRGSK.NSQNGTEDAaGSPdGSLFGDDN.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.48|      26|      30|     166|     194|       4
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  166-  194 (36.02/33.53)	GYIRMYnWvETANGKVPLTVAQ..KHPfVDS
  199-  226 (43.46/25.04)	GSLTTY.W.ENEETSVRTPPAQsaEEP.KDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.40|      21|     335|     235|     257|       5
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  235-  257 (36.83/32.22)	QHQATW.LLSGleSGAIN....LQTCRH
  572-  597 (32.57/21.30)	QPQRTFrFPSG..SGAVSavraMPNGRH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01079 with Med13 domain of Kingdom Fungi
Unable to open file!