<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01071
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MADITLPSSLLQPRDENEADTLLSVLGRIHDERGHFRHITEQGLQAEIAANENEEESSDTDEDEDSAEVDGAEGKDRREQLWTARAEMRQHVDSARNEALIALDFVSLLLSKDAPKQAELTMSPHLKQFIKPGTLAMDVWHNVQPDKEQQKLDDTIARSWRMQSLQASADSLLGAATRLEKNVRRETHYWEQVLSVSDKGWSISRLPRERHNLGVRFGFLEALGEFRDRGLAALRSDEDGNVLLDKGMGNNSKVLRVRIQKGDTIIGVSQMPDTSADSESALEARIRHARDSLYEEELFHEIIRESRSLASYGVDMRESIIRLPTRLSPTASLSASETHEVLIDLLPLTDIETKPREKQSEDAWAQAIALALRLFLSYTHRERLVRRSELPQPMSSAKRDTPVASIMRPVLTLLQHRTVLADISTYLQRIHKTLDAASVEASIETAPFDPALLRSAETIDALMQRGLTPIHSRLKVSLKVPHLSEALEFGIEVRTSISPPAFGSAMLVTSPIGLSRVEIPDIQELQDYLNTAIANALGQGILNKLTGWTLNDRCGVLGKANSNDKIGIEVHAGEDSAHDGLILRTPKDRFEWKAQDEMKQNGFWETVKQEVWNGA |
Length | 615 |
Position | Head |
Organism | Aureobasidium pullulans EXF-150 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Dothideomycetidae> Dothideales> Saccotheciaceae> Aureobasidium.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.465 |
Instability index | 48.65 |
Isoelectric point | 5.30 |
Molecular weight | 68836.72 |
Publications | PubMed=24984952
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP01071
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.04| 38| 509| 50| 90| 3
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50- 90 (59.66/46.29) ANENEEESSDTDEDEDSAEvDG...AEGKDRREqlWTARAEMRQ
560- 600 (66.38/40.97) ANSNDKIGIEVHAGEDSAH.DGlilRTPKDRFE..WKAQDEMKQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 136.40| 32| 146| 148| 179| 4
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148- 179 (51.58/31.97) EQQKLDDTIARSWRMQSLQASA.DSLLGAATRL
260- 288 (41.15/24.10) ..QK.GDTIIGVSQMPDTSADS.ESALEARIRH
295- 327 (43.67/25.99) EEELFHEIIRESRSLASYGVDMrESIIRLPTRL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.18| 26| 216| 232| 257| 5
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232- 257 (43.11/30.14) AALRSDEDGNVLLDKGMGNNSKVLRV
451- 476 (43.08/30.11) ALLRSAETIDALMQRGLTPIHSRLKV
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