<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01055
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MENIDVDELFGEESINAAIAATFDTDALFQRIERSHIVGCCQRLAWSRTSCIAQISADSRKVVVRALCRDKNTANWSLSDETEVNASEGAIFTHVEWSSSGFDLVIADQFGRFTLFSLTHALNSLERRPVNLTSSVDDLNQVVGLHWLPTNPAGQTRTALILPAAKEGNRWVNTMKLHEVHGVSNPIDNKAAFLCVTRRGLLKLIYEQPGQPWSQYVFTLDNLADSGDVLTHAAFCQANQHLVMVTYDTSKRLRLYKIMINWNANAGDGTNHKTTLNPQIAVLHVELLDRCVPQSSERAASAQLSSLHVEPISQAIDNSTFTVVAVFTSAAQDHSGKFSIISRWDLQQVDATLHDSFKSLRPTTAQPATNKPVQRLYRTEDIFSQKAILALQSNVYHNMFAFAASDGTVEFRSRETMQIIISDGDTNKATSLPQNGFSFPNEDCIDIFLSPSLAASVITKPDGTLKLHNAEYQHNWKDAKDDNDLAQAAVVSLARELASVTCYQIGFDDLLSVIPTDLDRSLRCKFISEIFRTISRNVDFSLDDPKLQSGKVLKDSLLFRIASAQLLVSYNTNPKRRDIPAKSAWVLLNLRSVCTNIAQTLTMTQQIRGMHNMESSLFVSLKGLVRWSLDLMTLIFDDMIETMRFCKGDFDRGRILAYIHEKNSVSLHILLCSTTRALLGMLGNLIRNFAMRVVKTQEKVRLSSRTNDIRDSVELQQMEAMMGSELPFEIKLFEQLVAEVDGNVRATYQAAQSSPPHRSFYEQSMLVDADIPEALSPVLQRLFGEIVPRLESQIDGVAIYLRDTAWLDLGEDEEAIKRAERQQYDVLRKCAIPPNAKVRQCRRCGSVIENLTDGHMAAWVQNAHKMCICLSHWTVV |
Length | 876 |
Position | Tail |
Organism | Aureobasidium namibiae CBS 147.97 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes>
Dothideomycetidae> Dothideales> Saccotheciaceae> Aureobasidium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.167 |
Instability index | 42.44 |
Isoelectric point | 6.05 |
Molecular weight | 98178.67 |
Publications | PubMed=24984952
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP01055
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.38| 26| 213| 397| 423| 1
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397- 422 (42.73/29.16) HNMFAFAASDGTVEFRSRETMQIIIS
425- 450 (44.65/25.49) DTNKATSLPQNGFSFPNEDCIDIFLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.32| 17| 22| 279| 295| 3
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279- 295 (29.65/19.35) QIAVLHVELLDRCVPQS
303- 319 (28.68/18.49) QLSSLHVEPISQAIDNS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.48| 19| 20| 75| 93| 4
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75- 93 (33.40/20.58) NWSLSDETEVNASEGAIFT
96- 114 (35.08/21.95) EWSSSGFDLVIADQFGRFT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.00| 25| 47| 643| 668| 7
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643- 668 (40.19/30.94) MRFCKGDfDRGRILAYIHE.KNSVSLH
691- 716 (35.82/22.00) MRVVKTQ.EKVRLSSRTNDiRDSVELQ
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