<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01017
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MTTAVVWERVIEITKCGRSTEVWSIEVTSWLKTAGVLLPSVELAHRLVSHICWDNNVAVTWKYLEKAMESRMVPPFLVLALLSTKVVPNRHPLLHPPAYSLYLHLLNTHAFSLSSLINSPNYPSLMNSIHQLLRLSQLYHDSSSYPPPPPPPHPGVVLVQFLFTLVWQLLQASLQDEALLQHKNSLLFLDHPDLTMELDNHHHHPLHAKNTATAIQFIAHFLHNKLTSRILSLVQRNMSTHWGAFVDDLEQLAANSLILRSLKHDVSPELFYPLNLKLNWPLSCESNKKMKLSSVLCASGSGSADQSHNDSSLWLPIDLILEDAMDGHHHVMAASAVELLTDLVKALQAVNATAWHNAFLGLWFAALRLVQRERDPSEGPVPRLDTCLCMLLCITTLVVANLIEEEEGELIEEAERSPRNQRKDKLAMGKRRGELVASLQLLGDYEDLLNPPQPVTWVANQAAAKATMFVSGHSGYLEYMNVNDLPTNCSGNLRHLIVEACIARHLIDTSAYFWPGYVSAPSNQLPRGIPNHLPSWSSLMKGSLLNPPWVNVLVATPASSLAEIEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEHVVFFIIKLLSPAVPPKYAGTENHLISYAPFLNVLLIGISSVDSVQIFSLHGAVPLLAAALMPICEAFGSCVPSVSWTAATGEKLSCHVVFSNAFVLLLRLWQFNHPPVEHVMGGAATPALGSQLGPEYLLLVRNSTLASFGKSPRDRIKSRRFSKMISFSTEPVFMDSFPKLNTWYQQHQECLASTRCALVPGGPILRIVDALLSMMCRKINRSAQSLTSTTSGSSNSSGSSLDDALMKLKVPAWDILEAAPFVLDAALTACAHGRLSPRELATGLKDIADFLPASLATIVSYLSAEVTRGVWKPAFMNGTDWPSPAANLSIVEQQIKKILAATGVDVPSLAIDGNAPATLPLPLAAFLSLTITYKLDKSSERFLVLIGPSMINLSAGCPWPCMPIVGSLWAQKVKRWSDFFVFSASRTVFHHSRDAVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGFGSHFLGGISPVAPGILYLRVYRSIRDAMFLTEEIVSLLMLSVRDIASGGLPNGEAHKPKMTKYGMRYGQVSLAASMTRVKHAALLGASFLWISGGSSLIQSLITETLPSWFLSAPGLEQEVGESGVVVAILRGYALACFAVLSGTFAWGIDSLSAASKRRPKIIGIHLEFLANALDGKISLRCDCATWRAYVSGFMSLMVSCTPLWIEELDVDMLKRVSKGLRQMNEDGLALQLLEIRGKSLMGEVAEMIIQNEL |
Length | 1316 |
Position | Tail |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.196 |
Instability index | 46.21 |
Isoelectric point | 6.84 |
Molecular weight | 143983.42 |
Publications | PubMed=22089132
PubMed=24767513
PubMed=30397259
|
Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP01017
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.02| 15| 89| 526| 540| 1
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526- 540 (31.09/18.84) PR..GIPNHLPSWSSLM
615- 631 (23.93/12.59) PKyaGTENHLISYAPFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 169.17| 53| 353| 324| 383| 2
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330- 383 (87.18/63.43) HVMAASAVELLTDLVK....ALQAVNATAWHNAfLGLWFAA..LRLVQRERDPSEGPVPR
687- 745 (81.99/42.58) HVVFSNAFVLLLRLWQfnhpPVEHVMGGAATPA.LGSQLGPeyLLLVRNSTLASFGKSPR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 227.64| 71| 788| 424| 496| 5
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424- 496 (116.06/80.60) DKL.AMGKRRGELVA.SLQLLGDYED..LLNPPQPVTWVANqAAAKATMFVSGHSGYLEYMNVNDLPTNCSGnLRHL
1212- 1286 (111.58/68.90) DSLsAASKRRPKIIGiHLEFLANALDgkISLRCDCATWRAY.VSGFMSLMVSCTPLWIEELDVDMLKRVSKG.LRQM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.65| 29| 104| 1042| 1075| 6
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1042- 1075 (50.05/36.62) LGSACIYNNGG...VGALLGHGFGSHFLGgispvAPG
1146- 1177 (49.60/25.88) LGASFLWISGGsslIQSLITETLPSWFLS.....APG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 466.73| 140| 676| 173| 317| 7
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102- 148 (39.65/16.27) ...................................................YLH.LLNTHAFSLSSLINSPN.Y.PSLMN..SIHQL.....LR..............LSQLYHDSSS...YPPP..............................................
173- 317 (232.31/161.02) SLqDEALLQHK.NSLLFLDHPDLTME..LDNHHHHPLHAKNTATAIQFIAHFLHNKLTSRILSLVQRNMSTH.W.GAFVD..DLEQLAAN.SLI..............LRSLKHDVSPELFYPLNLklNWPLSCESNKKMKLSS..VLCASGSGSADQShnDSSLW..LPI
832- 996 (194.77/120.60) SL.DDALMKLKvPAWDILEAAPFVLDaaLTACAHGRLSPRELATGLKDIADFLPASLAT.IVSYLSAEVTRGvWkPAFMNgtDWPSPAANlSIVeqqikkilaatgvdVPSLAIDGNAPATLPLPL..AAFLSLTITYKLDKSSerFLVLIGPSMINLS..AGCPWpcMPI
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