<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01016

Description Adenine nucleotide alpha hydrolase-like domain kinase
SequenceMLPRISLLLSIAIVDAKMYIQCLDVLLEDTDVVKAITEYVSYAAIENLIVGAPSRHGFIRSFKSSNTPSGISKGAPDFCTVYVISKGKISSVRNASRAAPHTSPLLNHIHNNLTSEDVNQTAQQICSRRMNMRDRTSMKPNSWQDESMKSPFGRRARGTSGMLCVDFTDSDTDISFVSSGRPSSACSSSIYDYMDSGRTSRISTSTDRSSGSHRLGIKFTEPSSPDTSFSLDSSRTSCSYSNMDETEADMRRLQLELKQTMDMYNTACREALAAQHKLMEMSHWKIEEEKKLEEARLAQEAALAIAEREKARSKAAMETAEAARKIANVELNKRSGVEVKSLKETEELRKLLDNLAQTDLRYRRYNIEEIEAATNMFSEKQKIGEGGYGPVYKCYLDHTSVAVKVLRPDAAQGKSQFQQEVDILSCIRHPNLVLLLGACPEYGILVYEYMANGSLEDCLTRKKNDRVLCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVCKISDVGLARLVPVVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRHPMGLAHHAEQSIENGTFQEMLDPSLSEWPLQQAISLANIAVNCAQLRRKDRPDLAKEVLPELVKLTEFAEDNMGPIFLGGGITCSSSNEPSPNHSEASMTQDVMSDPQIVNSGSSISPPPEEENS
Length702
PositionTail
OrganismMedicago truncatula (Barrel medic) (Medicago tribuloides)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
Aromaticity0.06
Grand average of hydropathy-0.361
Instability index54.64
Isoelectric point5.79
Molecular weight77895.61
Publications
PubMed=22089132
PubMed=24767513

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01016
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.68|      28|      47|      52|      97|       2
---------------------------------------------------------------------------
   52-   79 (49.80/58.46)	APSRHGFIRSFKSSNTPSGISKGAPDFC
   99-  126 (48.88/23.22)	APHTSPLLNHIHNNLTSEDVNQTAQQIC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     220.64|      72|     259|     352|     433|       3
---------------------------------------------------------------------------
  352-  433 (102.41/90.20)	LDNLAQTDLRYRRYNIEEIeaATNMFSEKQKI...GEGGYGPVykcYLDHTSVAVKVLRPDAAQGKSQFQQevDILScirHPNLV
  613-  687 (118.24/73.52)	LANIAVNCAQLRRKDRPDL..AKEVLPELVKLtefAEDNMGPI...FLGGGITCSSSNEPSPNHSEASMTQ..DVMS...DPQIV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.49|      33|      49|     150|     195|       4
---------------------------------------------------------------------------
  158-  195 (55.97/47.41)	GTSG..MLCVDFTD.SDTDISF.VSSGRPSsaCSssiYDYMD
  208-  244 (48.52/21.30)	RSSGshRLGIKFTEpSSPDTSFsLDSSRTS..CS...YSNMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.64|      22|      47|     267|     294|       5
---------------------------------------------------------------------------
  249-  273 (31.89/31.02)	DMRRLQLELKQTMDMyntACREALA
  280-  304 (30.75/14.32)	EMSHWKIEEEKKLEEarlAQEAALA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01016 with Med32 domain of Kingdom Viridiplantae
Unable to open file!