<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00988
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MENAMDSRQIPIKSAIEVLTEGIKTLQIFNQASWHETFLALWLSALRLVQRERDPPEGPIPHLEARLCMLLSIVPLVIVNVLRDDTEHNLSTAPVSVGSEYKHEMKSDLSMKLGLISSVQVLGHFSGLLCPPALVVDAANQAARKASSFIYNSMKEKGEPFTSINANANSNAGGNLRHLIVEACIARNLMDTSVYFWPGYVSTSVMSLSDSTPLGKSPWLTFMEGTPLNNSLINALAATPASSIAEIEKLYYIALSGSEVERPTAAKILCGASLSRGWYIQEHVVHYVVKLLACPVPHSNSGTRGLFVDNMSMISAVLRGASSVDTLHILSLHGVVPTVAASLLPLCEAFGSISPTPISTGDESSTSVYMAFSLAFLFLIRLWKFCRPPLDQCITEGGIAVGGLEYLLSLHNNCVMSSQDKQKSNQNLFDSASFKPVYIDSFPKLRALYCQYKSCVASTLSGISTGNSIHQTASVILSMIYQKMSKGGISSSNSSSPNSSNACSALINSGEDALQRPVLPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPASIAAIIDYFSSEVTRGVWKQVPMNGTDWPSPAAVLQSVESEIKAILTHVGVEVPNCSSGGSPVTLPLPMAALVSLSITFKLDKSLEYIHAITGAALENCASGCPWPSMPVIGSLWAQKVRRWHNFIVVSGSRSVFRHNNESVAQLVRSCFTSFLGVLSGSNSKLTAECSVNGLLGSSITAPGAFPFVAPGFLYLRSCRDIHNVQYLNDVIVGLVTEYSNELAGIRASSGSSRLKSNESSLFLAAQSAKEMATLGASLLCSAGGIQLVQELYKETIPTWLLSSRDVKRKNDNVMSYILEGYAIAYLLTFSGSILWGVGTKLPSPKLSRRNHTIGVHLDFLAEVMERKISLSCNPITWKTYVCCLVGLMVSFAPAWLQEMKVDSLRKLAHGLSRWNEHELALSLLQRGGTAAMGALAELINVIEFEHKKPCS |
Length | 992 |
Position | Tail |
Organism | Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Medicago.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.184 |
Instability index | 47.27 |
Isoelectric point | 7.08 |
Molecular weight | 107293.54 |
Publications | PubMed=22089132
PubMed=24767513
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP00988
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 512.93| 166| 296| 405| 584| 3
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405- 584 (259.48/170.65) EYLLSLHNNCVMS.......SQDK...QKSNQNLFDSASFKPvyiDSFPKLRALYCQYKSCvastlSGIstgNSIHQTASVILSMIYQ.KMSKGGISSSNSSSPNSSNAcSALINSGEDALQRPVLPAWEVLEA..LPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPASIAaiIDY...FSSEVTRGVWKQVP
702- 883 (253.45/137.86) ESVAQLVRSCFTSflgvlsgSNSKltaECSVNGLLGSSITAP...GAFPFVAPGFLYLRSC.....RDI...HNVQYLNDVIVGLVTEySNELAGIRASSGSSRLKSNE.SSLFLAAQSAKEMATLGASLLCSAggIQLVQELYKETIPTWLLSSRDVKRKNDNVMSYILEGYA..IAYlltFSGSILWGVGTKLP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.33| 28| 176| 42| 104| 4
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73- 100 (46.68/59.96) IVPLVIVNVLR.DDTEHNLSTAPVSVGSE
335- 363 (44.65/ 6.82) VVPTVAASLLPlCEAFGSISPTPISTGDE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 127.39| 38| 648| 253| 291| 5
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253- 291 (61.47/40.28) IALSGSEVERPTAAKILCG..ASLSRGWyIQEHVVHYVVKL
909- 948 (65.92/38.52) ISLSCNPITWKTYVCCLVGlmVSFAPAW.LQEMKVDSLRKL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.62| 13| 648| 34| 54| 6
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34- 51 (19.57/27.06) WHETFLalwlsALRLVQR
955- 967 (25.05/ 9.27) WNEHEL.....ALSLLQR
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