Description | Uncharacterized protein |
Sequence | MDIITQLQEQVNTIAGLAFNTFGMLQRDAFPVRLSPNYPEPPTTPSSAAEDAASPAEEPKLVSAALVNAAKQFDLLVAALPLAEGGEEAQLKRIAELQAENDAADQELQKQLEAAEKELKQVQELFRQATDNCLNLKKPD |
Length | 140 |
Position | Middle |
Organism | Coffea canephora (Robusta coffee) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.382 |
Instability index | 56.13 |
Isoelectric point | 4.40 |
Molecular weight | 15214.93 |
Publications | PubMed=25190796 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP00948 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 98.11| 26| 27| 74| 99| 1 --------------------------------------------------------------------------- 48- 69 (25.56/ 9.12) ....AAEDAASPAEEPKLVSAALV..NA 74- 99 (39.75/17.31) DLLVAALPLAEGGEEAQLKRIAEL..QA 102- 129 (32.79/13.29) DAADQELQKQLEAAEKELKQVQELfrQA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AQLKRIAELQAENDA 2) PAEEPKLVSAALVNAAKQFDLLVAA | 89 55 | 103 79 |
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