<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00929

Description Uncharacterized protein
SequenceMQETRRGKSRNSFEKSIKARILIKLKGFGCVRIDPSYRTKMPIPRGNAEMVCVAIDKDKGSQYALKWAVDNLVGKGKYVTLIHVKQKQPSSASLVSHIALADANDSIQRSYKDADGQSKELFLPFRCFCTRKDIRVNEVMIEDLDIAKGICDYVRANFVENLVLGAPSKSAFVRRFKTNDVASTVSKVAPDFCNVFTISKGKLSSVRAASCPVPNPPPRQGQNQGTTNPVLSDARLMHGSGVRGFSHDKSPIAPRTLAEDMDSIKSPFTRGKTQNRSSGDFSLPDSDISFISSGRSSMDHLFPLPDIQDMAFPPRLSNGSETENTSNFGSSFSGPRTPDTSSSGTFPSRTHENGSISWSSSSSQSQEDVEAEMRRLKQELKQTMEMYSTACKEALLAKQKALELQRWKMEEQQKLEEARLAEEAALAIAEKEKAKCKVAIEAAEAAQRIAELEAQKRKNAEMKALREEEERKRVLHTLAHGDVRYRRYTIDEIETATDHFSESRKIGEGGYGPVYKCNLDHTPVAIKVLRPDASQGRAQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMPNGSLDDRLFRRGQTPVLPWQLRFRIAAEIGTCLLFLHQTKPEPLVHRDLKPANILLDRNYVSKIGDVGLARLVPPSVADTVTQYLMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGVMLLQIITAKPPMGLTHHVQRAIEKGKFADMLDPAVPDWPVEEALNFAKLALKCAELRRKDRPDLRTVVLPELDRLRTLAEERMSGIIPSPATLVRETPKCASQVIFKVK
Length800
PositionTail
OrganismCoffea canephora (Robusta coffee)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea.
Aromaticity0.06
Grand average of hydropathy-0.431
Instability index46.12
Isoelectric point8.95
Molecular weight89214.22
Publications
PubMed=25190796

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process
pollen tube growth	GO:0009860	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00929
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.25|      27|      48|     391|     417|       1
---------------------------------------------------------------------------
  391-  417 (47.77/32.02)	CK...EALLAKQK..ALELQRWKMEEQQKLEE
  436-  467 (33.48/20.35)	CKvaiEAAEAAQRiaELEAQKRKNAEMKALRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.98|      19|      48|     259|     284|       2
---------------------------------------------------------------------------
  259-  278 (29.06/19.12)	EDMdSIKSPFTRG.KTQNRSS
  308-  327 (27.93/14.36)	QDM.AFPPRLSNGsETENTSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.77|      10|      15|     186|     195|       3
---------------------------------------------------------------------------
  186-  195 (18.98/11.71)	SKVAPDFCNV
  204-  213 (17.80/10.52)	SSVRAASCPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.55|      16|      17|     142|     158|       5
---------------------------------------------------------------------------
  142-  158 (24.92/20.65)	EDLDI.AKGICDYVRaNF
  160-  176 (22.64/13.23)	ENLVLgAPSKSAFVR.RF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.91|      14|     637|      27|      41|       6
---------------------------------------------------------------------------
   27-   41 (26.11/25.35)	GFGCvRIDPSY.RTKM
  665-  679 (26.80/19.68)	GTFC.YIDPEYqQTGM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.29|      20|     167|     583|     602|      17
---------------------------------------------------------------------------
  583-  602 (38.87/18.67)	FRRGQTP.....VLPWQLRFRIAAE
  747-  771 (29.42/12.78)	LRRKDRPdlrtvVLPELDRLRTLAE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00929 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DHLFPLPDIQDMAFPPRLSNGSETENTSNFGSSFSGPRTPDTSSSGTFPSRTHENGSISWSSSSSQSQEDVEAEMRRLKQELKQT
2) RAASCPVPNPPPRQGQNQGTTNPVLSDARLMH
3) VRGFSHDKSPIAPRTLAEDMDSIKSPFTRGKTQNRSSGDFSLPDSDISF
299
207
242
383
238
290










Molecular Recognition Features






MoRF SequenceStartStop




NANANA