Description | Uncharacterized protein |
Sequence | MDIITQLQEQVNTIAGLAFNTFGTLQRDAPPVRLSPNCPEPPANPSSAAEDAASLAEQPKLMSAALVNAAKQFDLLVAALPLAEGGEEAQLKRIAELQAENDAVGQELQKQLEAADKELKQVQELFRQATDNCLNLKKPD |
Length | 140 |
Position | Middle |
Organism | Coffea canephora (Robusta coffee) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea. |
Aromaticity | 0.03 |
Grand average of hydropathy | -0.346 |
Instability index | 54.82 |
Isoelectric point | 4.48 |
Molecular weight | 15060.84 |
Publications | PubMed=25190796 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU366036 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP00927 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 58.89| 21| 27| 88| 110| 1 --------------------------------------------------------------------------- 88- 110 (28.35/22.28) EAQLKRIAEL..QAENDAVgqELQK 116- 138 (30.53/17.20) DKELKQVQELfrQATDNCL..NLKK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AEDAASLAEQPKLMSAALV 2) EAQLKRIAELQAE | 49 88 | 67 100 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab