<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00925

Description Uncharacterized protein
SequenceMKNEIQMAPHSGTSSDESTTNNLTAVAIDRDKNSASAVKWAVDHLLLTDHSIILIHVKIRNPQPQSLGADGEVANAYNASGITDEQQLFKPSRLYCARKGIKVKEVLLEGVDVSKAILDYISDNHIKNIVLGASSRNPIARKFWTHDVPAIVNKAAPDFCSVYVIAKGKKQSFRPAVRSKSTPVTPKQESARNQSPIRFNHSEPEDLSRYMALSRREEQKGVGPAKVWPPAALPFGSMENIDISFVAKSNVPSRNSLSTSDSDSTAPFHFGPMEAIIKNVDFANMLDAANSGSSGSSSLEAEMNRLKLELKQTLEMYNTACKEALSAKQKAKELDRWKMEEALKIEQARHSGESAFAIVEMEKAKRRAAIEAAEKAQKLADIEAQRSKHAEEKAKREAEGKSRALKILSQNDCRCRKYTIEDIEIATNKFSSSSKIGEGGYGPVYKGKLDHTPVAIKILRPDAAQGRKQFQQEVEVLSSIRHPNMVLLLGACPEYGCLVYEYMNYGSLEDRLFRKGNTPPIPWAFRFKIAADIATGLLFLHQTKPEPLVHRDLKPANILLDQNFVCKISDVGLARLVPASVADTVTQYHMTSAAGTFCYIDPEYQHTGKLGTKSDIYSLGVLLLQIITARPPMGLTHHVERAIEEGRFADLLDPTVPEWPVEDALSFAKLALQCVELRKKDRPDLGSVIVPELSRLKKLGMNSMFNDS
Length708
PositionTail
OrganismCoffea canephora (Robusta coffee)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea.
Aromaticity0.06
Grand average of hydropathy-0.385
Instability index43.06
Isoelectric point8.71
Molecular weight78360.70
Publications
PubMed=25190796

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00925
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.43|      27|      28|     353|     379|       1
---------------------------------------------------------------------------
  315-  334 (23.64/14.07)	.......EMYNTACKEALSAKQKAKEL
  353-  379 (42.27/31.50)	ESAFAIVEMEKAKRRAAIEAAEKAQKL
  383-  407 (37.52/27.06)	EAQRSKHAEEKAKREA..EGKSRALKI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.21|      32|      33|     206|     238|       2
---------------------------------------------------------------------------
  178-  202 (21.07/ 7.16)	..........RSKSTPVTPkqesARNQSP..IRFNHS
  206-  238 (52.01/31.99)	DLSrYMALSRREEQKGVGP....AKVWPPAALPFGSM
  242-  273 (52.13/27.92)	DIS.FVAKSNVPSRNSLST....SDSDSTAPFHFGPM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.38|      34|     273|     135|     175|       3
---------------------------------------------------------------------------
  135-  175 (53.05/62.08)	SRNPI.ARKFWTHDVPAIVNKaapdFCSVYVIAKGkkqSFRP
  409-  443 (58.33/45.39)	SQNDCrCRKYTIEDIEIATNK....FSSSSKIGEG...GYGP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00925 with Med32 domain of Kingdom Viridiplantae
Unable to open file!