<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00903

Description Uncharacterized protein
SequenceMATKEGKAIGIDLGTTYSCVGVWLNDRVEIITNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRYSDPSVQADMKLWPFRVVPGPGDKPLIVVTYKGEEKRFAPEEISSMVLTKMREIAESFLGHKVNNAVVTVPAYFNDSQRQATKDAGSIAGLNVMRIINEPTAAAIAYGLDKKHQKRGEQNVLVFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVSEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDLFLKCMEPVEKVLRDAKIDKSKVDEVVLVGGSTRIQKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGDSKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPSKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQINVAFDIDANGILNVTAEDKTAGVKNQITITNDKGRLSKEDIEKMVRDAEKYKSEDEEVKKKVEAKNALENYAYNMRNTVRDEKFDSKLKPDDKQKIEKAVEETIEWLDRNQLAEVDELEDKLKELENICNPIIAQMYQGGGGGGGPMGDDMHGGGGGGGGGSTDGTGAGPKIEEVD
Length655
PositionUnknown
OrganismCoffea canephora (Robusta coffee)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea.
Aromaticity0.06
Grand average of hydropathy-0.458
Instability index36.59
Isoelectric point5.26
Molecular weight71920.50
Publications
PubMed=25190796

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00903
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.19|      27|      32|     525|     556|       1
---------------------------------------------------------------------------
  525-  556 (34.55/31.75)	RDaEKY....KSEDeevKKKVEaKNALENYAYNMRN
  559-  589 (43.64/23.20)	RD.EKFdsklKPDD...KQKIE.KAVEETIEWLDRN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.55|      26|      59|     381|     414|       2
---------------------------------------------------------------------------
  340-  380 (26.25/15.78)	VLVG.GSTRIQKVqqLLQDffngkelcksINPdeaVAYG....AAV
  384-  414 (34.30/27.17)	ILTGeGDSKVQDL..LLLD..........VTP...LSLGletaGGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.49|      17|      21|      37|      54|       3
---------------------------------------------------------------------------
   37-   54 (25.97/23.66)	NRT..TPSYVAFtDTERLIG
   59-   77 (25.52/17.54)	NQVamNPHNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.75|      10|      26|     205|     214|       5
---------------------------------------------------------------------------
  205-  214 (19.09/10.67)	LGGGTFDVSL
  233-  242 (19.67/11.22)	LGGEDFDNRL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00903 with Med37 domain of Kingdom Viridiplantae
Unable to open file!