Description | Uncharacterized protein |
Sequence | MECFYGLIVAAMFGIFIVLWEAEWYCAFHRADASTVWKEFTTPEGRKYYYNKETKESKWTMPEELKLAREQAEKAASFGSHLEMGVPTAPTSTSVGQPPLVTSVSSTSSTVSAIASSPIAVTPVAAVVNSPTVAVFGSPAVPTVQPAVTSMVSVPSLGETSASPAPTTGSLGMHNVENNSSHIAEGSTGEASSQDIEEAKKGMAVAGKVNVTTSEEKPMDDEPLVFTNKQEAKNAFKALLESANVEADWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQRKKIEAEERRLRQRKAKEEFTKMLEECRELTSLTRWSKAVTMLEDDERFKAVEKESDREDLFRSYLVDLQKKERVKAQEEHRRNRSEYRQFLETCGFIKVDSQWRKVQDLLEDDERCSRLDKIDRLEIFQEYIRDLEREEEEQKKKEKEQLRRAERKNRDAFRKLMEEHIAAGILNAKTLWRDYCQKVKDTEAYQAVALNTSGSTPMDLFEDVLEELENQYHDDKTRIKDAVKLEKISVLPMWTLEDFKAAIKESISSEVSDINLQLVFEDLLERAKEKEEKEAKKRQRLAKDFSDLLSTIKEITATSNWEESKELLEDSSEYRSIGEENSCKEIFEEYIARLQEKAKEKERKREEEKARKEREREEKEKKKDKDRREKEKEKEKDKEKEREREREREKEKGKERSKKDEVDTANADAIDDHGLKEEKKKEKDDHGLKEEKKREKDRDKKHRKRHHSVTDDASSEKDEKEETKKSRRHSSDRKKSRKHGHSPESDCETRHKRHRKDHRDGSRRGGGHEELEDGELGEDVEME |
Length | 815 |
Position | Unknown |
Organism | Coffea canephora (Robusta coffee) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.167 |
Instability index | 49.10 |
Isoelectric point | 5.79 |
Molecular weight | 94700.74 |
Publications | PubMed=25190796 |
Annotated function |
|
GO - Cellular Component | cytosol GO:0005829 IEA:EnsemblPlants integral component of membrane GO:0016021 IEA:UniProtKB-KW mediator complex GO:0016592 IEA:EnsemblPlants |
GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro |
Binary Interactions |
Repeats | >MDP00900 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 128.05| 32| 32| 628| 659| 1 --------------------------------------------------------------------------- 628- 655 (41.52/13.77) .....EKAKEKERKREEEKARKEREREEKEKKK 656- 682 (26.44/ 6.06) DKDRrEKEKEKEKDKEKERER.ERER.EK.... 714- 737 (31.60/ 8.70) EKDD.HGLKE.EKKR.......EKDRDKKHRKR 776- 804 (28.49/ 7.11) ESDC.ETRHKRHRKDHRDGSRRGGGHEELE... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 453.82| 66| 66| 297| 362| 2 --------------------------------------------------------------------------- 230- 285 (67.78/40.04) ............QEAKNAFKAL.....LES...ANVEADWT.WEQAMRVIINDKRYGAL...KTL...GERKQA.....FNEYL..MQRK. 286- 356 (97.85/61.51) KIEAEE.rrlrqRKAKEEFTKM.....LEE...CRELTSLTRWSKAVTMLEDDERFKAV...EKE...SDREDL.....FRSYLVDLQKKE 357- 423 (93.92/58.70) RVKAQE....ehRRNRSEYRQF.....LET...CGFIKVDSQWRKVQDLLEDDERCSRL...DK....IDRLEI.....FQEYIRDLEREE 427- 502 (70.65/42.09) KKKEKEqlrraeRKNRDAFRKL.....MEEhiaAGILNAKTLWRDYCQKVKDTEAYQAValnTSG...STPMDL.....FEDVLEELEN.. 503- 563 (47.12/25.29) ..QYHD......DK.....TRIkdavkLE......KISVLPMWT.....LED...FKAA...IKEsisSEVSDInlqlvFEDLLERAKEKE 564- 627 (76.49/46.26) EKEAKK....rqRLAK.DFSDL.....LST...IKEITATSNWEESKELLEDSSEYRSI...GEE...NSCKEI.....FEEYIARLQ... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 112.06| 19| 19| 86| 104| 3 --------------------------------------------------------------------------- 86- 100 (21.51/10.89) ......VPTAPTSTSVGQPPL 101- 119 (24.72/13.40) VTSV..SSTSSTVSAIASSPI 121- 141 (24.40/13.15) VTPVaaVVNSPTVAVFGSPAV 142- 157 (24.48/13.21) PT....VQPAVTSM.VSVPSL 158- 172 (16.95/ 7.32) GETS..ASPAPTTGSLG.... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.13| 14| 18| 41| 56| 4 --------------------------------------------------------------------------- 41- 56 (20.30/19.16) TTPEGRKyyYNKETKE 60- 73 (23.82/13.49) TMPEELK..LAREQAE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ELEDGELGEDVEME 2) PESDCETRHKRHRKDHRD | 802 775 | 815 792 |
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