<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00891

Description Uncharacterized protein
SequenceMAKALYLQEMIFNAAVAIDADKNSQFAVKWAVDRLNLNGFITLLHVKTQQNSSPQDVPKEGRAPTKDELAKFFLPYRGFCARKGVRVHEVVLHDIDVARAIAEYVIDNSISMIVLGASSRSALARAFRAQDMQSQLIKSIPDFCAVYVVSKVRAQAVKSATRSPNASSIASSRQQPQVGYLSDTPGSQQLTWLVSHKCFRITLLICPRNHELTKIDITLIWIRGSWRSAGSDRSHSDGGSPAVYSDKSSRDFVPMTSRRGQSKNRSPQCPSPQHPLSSSGTDFLHLPPLDGQPNSKNTSPPKTADSLQICPYNRNPGSKTPSNQLSGNNLNLHFPIQGSPSHSLSGSSDRSEPLSFQSSNLSFELLDQSHTSDASWTSSSSQGTGELEEEIKRLKQELKQSMEMYNSACKETLAAKGKAREIDEWKLDEARRIEGCRQTREFAMIMVETEKHKCKAAIEAAQMAQRLAELESQKRKEAEMKLLQEAEKKKKAMDALAHCDIRYRKYNIEEIETATGYFSPSEKIGEGGYGPVYKAYLDQTAVAIKVLRSDISQGKKQFQREVEVLSHMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFCRNGSTPLPWTIRFRIAAEIATALLFLHQTRPEPIVHRDLKPANILLDRNYVSKIGDVGLSRLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLCTKSDIYSFGVLLLQIITARTAMGLTYHVEEAIEHGSFQETLDPKVADWPVEDALSLAKLALKCCELRRRDRPDLGSVILPELERLRDLGSDAKAGSGNGNLDEAILHDQVSQESIPLSQVRVQSSAHFILSFTICPFIKA
Length839
PositionTail
OrganismCoffea canephora (Robusta coffee)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Gentianales> Rubiaceae> Ixoroideae> Gardenieae complex> Bertiereae - Coffeeae clade> Coffeeae> Coffea.
Aromaticity0.07
Grand average of hydropathy-0.393
Instability index48.42
Isoelectric point8.15
Molecular weight93352.12
Publications
PubMed=25190796

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00891
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     164.22|      43|      46|     249|     293|       1
---------------------------------------------------------------------------
  249-  282 (54.34/26.40)	..................SRDFV.PMTSRRGQ..SKNRSPQCPSPQHPLSSSGTD
  284-  331 (56.21/33.86)	LHLpPLDGQP.......nSKNTSpPKTADSLQicPYNRNPGSKTPSNQLSGNNLN
  332-  377 (53.67/23.76)	LHF.PIQGSPshslsgssDRS.E.PLSF...Q..SSNLSFELLDQSHTSDASWT.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.43|      47|      49|     642|     690|       2
---------------------------------------------------------------------------
  642-  690 (73.58/65.84)	KPANILLDRNYVSKIGdVGLSRLVPPSVADSVTqYHMTAAA..GTF.CYIDP
  693-  742 (71.85/53.56)	QQTGMLCTKSDIYSFG.VLLLQIITARTAMGLT.YHVEEAIehGSFqETLDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.47|      77|     255|     495|     581|       3
---------------------------------------------------------------------------
  495-  581 (112.25/106.00)	ALAHCDIRYRkyniEEIETATGYFSPSEKIGEggYGPVYKAYLDQTAVAIKVLRSDISQGKKQFQReVEVLShmrHPHMVLLLGACP
  759-  835 (130.22/89.23)	ALKCCELRRR....DRPDLGSVILPELERLRD..LGSDAKAGSGNGNLDEAILHDQVSQESIPLSQ.VRVQS...SAHFILSFTICP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.12|      15|     106|     106|     122|       4
---------------------------------------------------------------------------
  106-  122 (21.20/23.05)	IDnsISMIVLGASSRSA
  215-  229 (29.92/23.43)	ID..ITLIWIRGSWRSA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00891 with Med32 domain of Kingdom Viridiplantae
Unable to open file!