<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00882

Description Uncharacterized protein
SequenceMLSLSPQSIYRIDDVDVDDLSAMWNVFSKCKAHLQNGERLENMSWRLWYHERQSLRQQQQQQQHDYFSYIPPQSSSRTCSPVSSASTSSSSTCSSIKRFLSSLSPGHDVWSHQQTTPPNSSHNKLNACNASATTDAVITNQTSNNGSSESHDRQTWQQQLPQTQDTNHQHNNCIYRPPPSTQQQQQLPPKNHRQIMLVNDEDEDDEYDEDDDVDFLLDDDDDDFLDDDDDELMDDDEILITPSSTASHRNNNDDRFTKTQPRAPTPRPSLLSAMLQRQQQYRTKSTTASSYTIASPIKPAPSSSSTSSSSTSSADHHHFLRKELSESLRRNVLWEHIQQKTLIYHHPRQPLRRSSITTSYQQHYHHHGNNPPENGWLESFHGW
Length383
PositionKinase
OrganismLichtheimia corymbifera JMRC:FSU:9682
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Lichtheimiaceae> Lichtheimia.
Aromaticity0.07
Grand average of hydropathy-1.159
Instability index66.72
Isoelectric point5.50
Molecular weight44039.01
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00882
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.90|      12|      15|     200|     214|       1
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  200-  211 (23.79/12.07)	DEDEDDEYDEDD
  218-  229 (24.12/ 6.07)	DDDDDDFLDDDD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.15|      25|     121|      49|      73|       2
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   49-   73 (50.72/19.02)	YHERQSLRQQQ....QQ.....Q...QHDYFSYIPPQ
  150-  178 (40.35/13.97)	SHDRQTWQQQL....PQtqdtnH...QHNNCIYRPP.
  345-  373 (32.08/ 9.95)	HHPRQPLRRSSittsYQ.....QhyhHHGN...NPPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.44|      43|     223|      74|     116|       3
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   74-  116 (76.72/39.54)	SSSRTCSPV....SSASTSSSSTCSS.....IKRFLSSLSPGHDVWSH.QQTT
  289-  341 (56.72/27.47)	SSYTIASPIkpapSSSSTSSSSTSSAdhhhfLRKELSESLRRNVLWEHiQQKT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.45|      10|      21|      18|      27|       4
---------------------------------------------------------------------------
   18-   27 (19.15/12.65)	DDLSAM.WNVF
   38-   48 (16.30/ 9.74)	ERLENMsWRLW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00882 with Med13 domain of Kingdom Fungi
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