<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00787

Description Uncharacterized protein
SequenceMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQGDMKLWPFKVIAGPGDKPMIVVSYKGEEKQFSAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKAGSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTVKDEKISSKLAADDKKKIEDAIEQAIHWLDANQLAEADEFEDKMKELESICNPIIAKMYQGSGPDMAGGMDEDAPPAGGSSAGPKIEEVD
Length648
PositionUnknown
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.405
Instability index34.67
Isoelectric point5.17
Molecular weight71092.84
Publications
PubMed=24837971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00787
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.00|      18|      21|      38|      55|       1
---------------------------------------------------------------------------
   16-   33 (19.07/ 9.06)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.65/19.85)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.28/13.21)	NQvaMNPINTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.24|      18|      41|     337|     356|       2
---------------------------------------------------------------------------
  337-  356 (25.55/24.30)	VHDVVLVGGSTRipKVQQLL
  381-  398 (29.70/19.79)	VQAAILSGEGNE..KVQDLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     474.51|     161|     280|     156|     333|       3
---------------------------------------------------------------------------
  156-  333 (237.72/229.18)	DSQRQATKDAGVIAGLNVMRIINEPTAA.AIAYGLDKKAGsvGEKNVLIFDLGGGTFDvslltieegifEVKATAGDTHLGGEDFDnRMVNHfVQEFK...RKHKKDISGNpRALR....RLRTAC..ERAKRTLSSTAQTTIEiDSLYEGIDFY..TTITRA.RFEELNMDLFRKCMEPVEKCLRDAKMD
  450-  623 (236.78/179.55)	EGERARTRDNNLLGKFELSGIPPAPRGVpQITVCFDIDAN..GILNVSAEDKTTGQKN...........KITITNDKGRLSKEEIE.KMVQE.AEKYKaedEEHKKKVDAK.NALEnyayNMRNTVkdEKISSKLAADDKKKIE.DAIEQAIHWLdaNQLAEAdEFEDKMKELESICNPIIAKMYQGSGPD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00787 with Med37 domain of Kingdom Viridiplantae
Unable to open file!