<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00778

Description Uncharacterized protein
SequenceMAGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFSDPSVQSDMKHWPFKVVPGPGDKPMIVVRYKGEEKQFSPEEISSMVLTKMKEIAEAYLGQTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISTNARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSQVHDVVLVGGSKRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEADQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKDEIERMVQEAEKYKAEDEQVKKKVEAKNALENYAYNMRNTIRDEKIAGKLDAADKQKIEKAIDGAIEWLDGNQLAEVDEFEDKLKELEGLCNPIISKMYQGGGGDVPMGGGQPGSGYGKGSTGGSGSSGSGPKIEEVD
Length652
PositionUnknown
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.418
Instability index34.62
Isoelectric point5.58
Molecular weight71286.98
Publications
PubMed=24837971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00778
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.00|      51|     189|     166|     226|       1
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  166-  226 (63.53/58.00)	GLNVLRIINePTaAAIAYGLDKKAS.RSGEKNVLIFDLggGTFDVSLLTIeeGIfevkATAG
  358-  409 (83.47/44.67)	GKELCKSIN.PD.EAVAYGAAVQAAiLSGEADQKVQDL..LLLDVTPLSL..GI....ETAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.49|      18|      21|      34|      51|       2
---------------------------------------------------------------------------
   12-   29 (18.50/ 9.62)	....TTYSCVGVWQNDRveIIA
   34-   51 (32.66/22.17)	NR..TTPSYVAFTDTER..LIG
   56-   74 (25.32/15.66)	NQvaMNPHNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.18|      34|      34|     500|     533|       3
---------------------------------------------------------------------------
  500-  533 (54.47/28.66)	KNKITITNDKGRLSKDEIERMVQE..AEKYKAEDEQ
  535-  570 (49.71/25.66)	KKKVEAKNALENYAYNMRNTIRDEkiAGKLDAADKQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00778 with Med37 domain of Kingdom Viridiplantae
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