Description | Uncharacterized protein |
Sequence | MDNGSQSSGAQFRSVVPAQQGQPYIPQQFRPVGQGMPSNVGMLPGQSQTLQFSQPMQQLPQWPNQPGHATASQAVPLPYAHPNRLLTSGPPQLQQTAPPVSNHATGLGMSGVPLSSPYAFAPSSFGQPQNNAIASTQFQPMPQMHAHLVPPGGQPWLPAGSNGQSLATAVQPTGQQPSVSSSSDPAVNAPNVGQLASSDWQEHTAADGRRYYYNKKTKQSSWEKPFELMTAIERADASTVWKEFTTSEGKKYYYNKVTKQSKWSIPEELKLAREHAQQAVGQGTQSEVDAASHASSTVAVTSGETSNIAISASSSSSTLFGATSSPIPVTPVSNPAVVVSGSSTLLVAQSSIANTAGVQPAVVTTTLLPTAVSGSTGVTATLVNAKMLTTGFDNLAPQVAANSVDGASMLESEQEMKQRMEVAGKSDADVLEEKAADDEPLVFATKLEAKNAFKALLESANVQSDWTWEQAMREIVNDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKRAREEFTKMLEESNELTSSMKWSKAVSLFESDERFKAVEKARDRQDLFNNYMEELARKEKEKAEEDHRRNKAEYKKFLESCDFIKVNSRWQKVQDRLEDDERCLRLEKVDRLVVFQDYIRDLEKEEEKQKMIQKEQRRRAERKNRDAFRKLLEDHVADGSLTAKTHWLDYCLKVKDLPQYHAVATNTSGSTPKDLFEDVAEELEKQYHDDKTRIKDAMKSGKITMTSAWTFEDFKAAISDDIGSPPISDINLKLLYDELLERAKEKEEKEAKKRQRLADDLTKLLHSFKEITASSTWEDSKQLIEESQEYRSIGEESVSREIFEEYVAHLQEKAKEKERKREEEKAKKEKEREEKEKRKERERKEKEKEKEREREKGKERIKKDETDSENVDATDSYGHKEDKKREKDKDRKHRRRHQSGADDISSDRDEKEESKKSRRHGSDRKKSRKHSYTPESDSESRHKRHKRDHRDSSRRNGGYEELEDGELGEDGEIQ |
Length | 1008 |
Position | Unknown |
Organism | Jatropha curcas (Barbados nut) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.060 |
Instability index | 58.37 |
Isoelectric point | 6.44 |
Molecular weight | 114041.31 |
Publications | PubMed=24837971 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro |
Binary Interactions |
Repeats | >MDP00775 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 99.22| 23| 24| 291| 313| 2 --------------------------------------------------------------------------- 291- 313 (36.30/25.65) ASHASSTVAVTSGETSNIAISAS 321- 340 (30.56/20.30) GA.TSSPIPVTP..VSNPAVVVS 353- 375 (32.37/21.99) ANTAGVQPAVVTTTLLPTAVSGS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 137.87| 24| 24| 950| 973| 3 --------------------------------------------------------------------------- 886- 903 (23.85/ 9.64) REREKGKERiKK.........DETDSE 917- 940 (37.56/19.59) KKREKDKDR.KHR..RRHQSGADDISS 950- 973 (42.95/23.51) KSRRHGSDR.KKS..RKHSYTPESDSE 975- 1000 (33.51/16.66) RHKRHKRDH.RDSsrRNGGYEELEDGE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 7| 481.37| 64| 65| 513| 576| 4 --------------------------------------------------------------------------- 408- 441 (23.81/ 9.54) ...........................................SMLESEQEMK.QR...MEVAGKSD..........ADVLEEKAA.DDEPL 445- 508 (77.17/50.44) TK.......lEAK....NAFKALLES...AN.VQSDWTWEQAMREIVNDKRYG.AL...KTLGERKQ........AFNEYLGQRKK.IEAEE 513- 576 (97.27/65.84) QK........RAR....EEFTKMLEE...SNELTSSMKWSKAVSLFESDERFK.AV...EKARDRQD........LFNNYMEELAR.KEKEK 581- 644 (81.25/53.56) HR........RNK....AEYKKFLES...CDFIKVNSRWQKVQDRLEDDERCL.RL...EKV.DRLV........VFQDYIRDLEKeEEKQK 647- 719 (66.53/42.28) QKeqrrraerKNR....DAFRKLLEDhvaDGSLTAKTHWLDYCLKVKDLPQYH.AVatnTSGSTPKD........LFEDVAEEL......EK 723- 783 (56.67/34.72) DD........KTR.......IKDAMK...SGKITMTSAWT........FEDFKaAI...SDDIGSPPisdinlklLYDELLER.AK.EKEEK 784- 851 (78.67/51.59) EA........KKRqrlaDDLTKLLHS...FKEITASSTWEDSKQLIEESQEYR.SI...GEESVSRE........IFEEYVAHLQE.KAKEK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 188.72| 38| 38| 196| 233| 5 --------------------------------------------------------------------------- 134- 171 (47.89/24.70) ASTQFQPmpqmhaHLVPPGGQPWLPAGSNGQS......LATAVQ 196- 233 (72.77/41.22) ASSDWQE......HTAADGRRYYYNKKTKQSSWEKPFELMTAIE 237- 274 (68.05/38.09) ASTVWKE......FTTSEGKKYYYNKVTKQSKWSIPEELKLARE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 40.19| 12| 16| 53| 65| 6 --------------------------------------------------------------------------- 53- 65 (22.74/18.92) SQPMqQLP.QWPNQ 72- 84 (17.46/ 7.93) SQAV.PLPyAHPNR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 104.13| 23| 66| 21| 44| 7 --------------------------------------------------------------------------- 21- 44 (42.89/35.55) GQPY.IPQQFRPVGQGMPSNVGMlP 89- 110 (37.43/25.27) GPPQ.LQQTAPPV.SNHATGLGM.S 111- 130 (23.81/12.62) GVPLsSPYAFAPSSFGQPQN..... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KRDHR 2) YEELED 3) YIPQQFR | 980 993 24 | 984 998 30 |
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