<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00763

Description Uncharacterized protein
SequenceMAAALRRQASLIVLAIVLFGSLLAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDNERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVKIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVRAEDKASGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQINDKDKLAEKLESDEKEKIETAVKEALEWLDENQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGSEGEDDDSHDEL
Length666
PositionUnknown
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.426
Instability index30.51
Isoelectric point5.11
Molecular weight73509.54
Publications
PubMed=24837971

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00763
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.10|      40|     243|     384|     424|       1
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  181-  239 (46.17/22.51)	AYFNDaqRQATKdaGVIAglnvariineptAAAIAYGLDKKGGeknILVFDLGGGTFDV
  384-  423 (72.94/41.57)	DYFDG..KEPNK..GVNP............DEAVAYGAAVQGG...ILSGEGGDETKDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.91|      19|      21|     582|     601|       2
---------------------------------------------------------------------------
  582-  600 (30.70/18.37)	KNQIN..DKDKLAEKLESDEK
  608-  628 (26.22/10.15)	KEALEwlDENQSAEKEDYEEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.63|      35|     197|     282|     323|       3
---------------------------------------------------------------------------
  283-  318 (53.24/40.15)	KDISKDNRALGKLR.RECERAKRAlSSQHQVRVEIES
  479-  514 (54.39/33.46)	RSLTKDCRLLGKFDlTGIAPAPRG.TPQIEVTFEVDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.99|      40|     196|     130|     179|       6
---------------------------------------------------------------------------
  131-  175 (51.34/61.22)	GKPYiQVKIRDGETKvFSPEEISAMIlTKMKETAEAflGKKIK...DA
  528-  570 (61.65/33.65)	GKSE.KITITNDKGR.LSQEEIERMV.REAEEFAEE..DKKVKeriDA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00763 with Med37 domain of Kingdom Viridiplantae
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