<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00761

Description Uncharacterized protein
SequenceMLSVAVAVNGGVGVGGKGSRRAVRWAVENLLPKANRFILVHVIPAITFIPSPSGNRLPVEEVDENVVALYVQDVKVKFQEIFLPFKKICKTQKTETLVLEGDNPASTLLKFVSEWGINSLILGSWSPNCIIRKLRGPGVPITVLNGAPETCNVRVVYKHKIITKSGNSSSITGTSRRHWVFTKRGYTKGSGSINDLAFEPEVYSSPVESKVQKSFGASSVSESDFSPLETQAFEHGDSSVNAAVDVGRTFQKLEDDPLTVSTQSQTFDSTASIKTDWSYVQAEIERLQLELRNTVTMYRRACAELVHTQSEVKLVSSEFVEEARRVNAALQREETLRKIAAVEKARYLQAKTEIEEAKNLFAKEAYERQMAELRAEKELLEKQKIVDAIFLSDRRYKKYTTDEIELATDCFSESNVIGEGGYGKVYKCNLDHTPVAVKVLRHDVVNKKEDFLREVEVLSQLHHPHLVLLLGACPENGCLVYEYLENGSLDECIFHRNEKPPLPWFIRFKIVFEVACGLAFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLITDVVPDNITEYRDSILAGTLYYMDPEYLRTGTIRPKSDLYAFGIIILQLLTARRPNGLILTVENAIINSQFANILDTSVTDWPLLETEELAQIALKCSKLRCRDRPDLDTEVLPVLRRIVVIADASLKLERSKTYAPSYYFCPILQEIMDEPYIAADGFTYEHRAIKAWLDRHRVSPVTKLRLQHSILIPNNTLRSAIQEWRSRQHLQVP
Length768
PositionTail
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.08
Grand average of hydropathy-0.212
Instability index48.75
Isoelectric point7.00
Molecular weight86656.35
Publications
PubMed=24837971

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00761
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.58|      13|      33|     488|     500|       1
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  488-  500 (26.13/16.95)	SLDECIFHRNEKP
  524-  536 (25.45/16.32)	SKPEPIVHRDLKP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.33|      26|      28|     332|     357|       2
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  332-  357 (40.19/29.88)	REETLRKIAAVEKARYLQAKTEIEEA
  363-  388 (38.14/27.97)	KEAYERQMAELRAEKELLEKQKIVDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.88|      22|      28|     281|     305|       3
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  281-  305 (31.65/34.36)	QAEIERLQLELrntVTMYRRACAEL
  309-  330 (34.23/26.22)	QSEVKLVSSEF...VEEARRVNAAL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      45.27|      10|      28|     189|     198|       4
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  189-  198 (15.59/10.69)	GSGSINDLAF
  206-  215 (14.68/ 9.60)	PVESKVQKSF
  216-  225 (15.00/ 9.98)	GASSVSESDF
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.54|      11|      98|     477|     487|       5
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  477-  487 (23.15/13.32)	GCLVY...EYLENG
  576-  589 (17.40/ 8.41)	GTLYYmdpEYLRTG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.04|      26|      98|     540|     568|       6
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  541-  568 (39.71/39.52)	LDRNYVSKIGDVGLAKLItdVVPDN.....ITE
  728-  758 (40.33/26.29)	LDRHRVSPVTKLRLQHSI..LIPNNtlrsaIQE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00761 with Med32 domain of Kingdom Viridiplantae
Unable to open file!