<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00749

Description Uncharacterized protein
SequenceMAGSWRARGLVVLAIVFFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKEYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQTAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGSAEDEEDSHDEL
Length665
PositionUnknown
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.443
Instability index28.21
Isoelectric point5.11
Molecular weight73449.43
Publications
PubMed=24837971

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00749
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.04|      25|      27|     562|     586|       1
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  536-  557 (33.87/17.21)	ND..K..GRL...SQEEIERMVREAEEFA
  558-  584 (32.11/16.00)	EEdkKVKERI..DARNSLETYVYNMKNQI
  585-  613 (29.06/13.89)	NDkdKLADKLesDEKEKIETAVKEALEWL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      27|     231|     241|       2
---------------------------------------------------------------------------
  231-  241 (20.46/12.07)	LGGGTFDVSIL
  259-  269 (21.85/13.40)	LGGEDFDQRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     221.55|      81|     188|     129|     230|       3
---------------------------------------------------------------------------
  129-  230 (103.95/110.74)	DG....KPYIQVKIKDGETKVFSpeeiSAMILTKmKETAEAFLGKKIKDAVVTVPA.............YFNDaqRQATKdaGViaglnvariiNePTaAAIAYG.......LDKKGGE..KNILVFD
  320-  426 (117.60/71.06)	DGvdfsEPLTRARFEELNNDLFR....KTMGPVK.KAMEDAGLEKNQIDEIVLVGGstripkvqqllkeYFDG..KEPNK..GV..........N.PD.EAVAYGaavqggiLSGEGGDetKDILLLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.64|      19|      22|      63|      83|       4
---------------------------------------------------------------------------
   63-   83 (27.11/26.09)	DQGNrITPSWVAFtDSERLIG
   88-  106 (33.54/21.15)	NQAA.VNPERTIF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.14|      34|     195|     281|     316|       5
---------------------------------------------------------------------------
  282-  316 (50.88/42.80)	KDISKDNRALGKLRREA.ERAKRAlSSQHQVRVEIE
  478-  512 (56.26/36.68)	RSLTKDCRLLGKFDLTGiPPAPRG.TPQIEVTFEVD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00749 with Med37 domain of Kingdom Viridiplantae
Unable to open file!