<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00733

Description Uncharacterized protein
SequenceMEGNEIVESEKILGLPPALPLTVGIAINGRSKSKYVVNWALENFIREEKVVFKLLHVRPKITAVPTPMGNSIPISQVRDDVAAAYKQEMEWQRSQMLLPFKKTCTRRKVQADVIIIESDDVANAIAEEVAKCTIKKLVIGASSRGLFTRKLEGNILSSRISTCIPLFCTVYVVSKGKLSSIRPSDLETKGSIGDDTSVTSSSTNSNSSTSHILSFQTDVSVGSCCQFHSPSLPMQRFQALSTINQGLLHARTNSIKTNHSRRQSLDTEEGKYRASSYPSSSEIGNTLSRSSSWKSLPTDYQSWVSDQASSSDALTVTDFSSASEKNIDFELEKLRIELRHVQGIYAMAQSEAIDASRKLNDLNKRRLEEAIKLEEINHREEEAKELARQEKERSEAAKREAEYMRECAEREASQRQEAELKAMREAREREKLDNVLSGTVQQYQKFTWEDIVSATSSFSENLKIGMGAYGTVYKCSLHHTTAAVKVLHSKENRNSKQFQQELDVLSKIRHPHLLILLGACPDHGCLVYEYMENGSLEERLLRVNNTPSIPWFERYRIAWEVASALVFLHNSRPKPIIHRDLKPANVLLDRNFVSKIGDVGLSTMLHSDASFATTMSKDTGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALTHIMETAIEDGNLAEILDSSAGNWPFEETKQLALLGLSCAELRRKDRPDLKEQVLPALERLKEVADRARNIISSAQCTPPNHFICPILKDVMMEPCVAADGYTYDRKAIEKWLEENDESPITNLPLSNKIVLPNYTLLSAIIEWKSNNK
Length812
PositionTail
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.387
Instability index46.64
Isoelectric point6.57
Molecular weight91014.56
Publications
PubMed=24837971

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00733
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.78|      44|      73|     582|     626|       1
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  582-  626 (71.12/53.31)	KPAnVLLDRNFVSKIGDVGLSTMLHSDA.SFATTMSKDTGPVGTLC
  658-  702 (70.67/48.01)	KPA.IALTHIMETAIEDGNLAEILDSSAgNWPFEETKQLALLGLSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.35|      18|      29|     263|     280|       2
---------------------------------------------------------------------------
  263-  280 (30.74/16.21)	QSLDTEEGKYRASSYPSS
  294-  311 (31.61/16.85)	KSLPTDYQSWVSDQASSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.29|      28|     278|     198|     232|       3
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  198-  232 (37.59/39.39)	VTSSSTNSNSStshilSFQTDVSVGSccQFHSPSL
  486-  513 (49.70/29.24)	VLHSKENRNSK.....QFQQELDVLS..KIRHPHL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00733 with Med32 domain of Kingdom Viridiplantae
Unable to open file!