<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00732

Description Uncharacterized protein
SequenceMNIKKKGFALLLLFLSEFLLGLAVAADDSPKLGTVIGIDLGTTYSCVGVSRNGHIEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAFNPENTVFDVKRLIGRKFDDPEVQRDIKFLPYKVVNKDGKPYIQVKVKGETKLFSPEEISAMVLGKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGAIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLSTSGDTHLGGEDFDHRIMDYFIKLIKRKYNKDISKDKRALGKLRRECERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKSDINEIVLVGGSTRIPKVQELLKDMFDGKEPNKGINPDEAVAYGAAVQGGILSGEGGEETKGLLLLDVTPLSLGIETVGGVMTKLIPRNTVIPTKKSQIFTTYQDQQTTVSIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVKAEDKAAKKSQSITITNDKGRLSQEEIDRMIKEAEEMAEEDKKVKEKIDARNKLETYIYNMRSTINDNDKLAEKIDSDDKEKIENALKEALEWLDDNQNVEKEDYDEKLKEVEAVCNPVIKQVYEKSGGSGNSADSEEEEESNDEL
Length662
PositionUnknown
OrganismJatropha curcas (Barbados nut)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Euphorbiaceae> Crotonoideae> Jatropheae> Jatropha.
Aromaticity0.06
Grand average of hydropathy-0.465
Instability index34.50
Isoelectric point5.11
Molecular weight73289.38
Publications
PubMed=24837971

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00732
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.84|      26|      26|     559|     584|       1
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  559-  584 (44.11/24.92)	KVKEKIDA..RNKLETYIYNMRSTINDN
  586-  613 (37.73/20.42)	KLAEKIDSddKEKIENALKEALEWLDDN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.04|      17|      21|      64|      81|       2
---------------------------------------------------------------------------
   64-   81 (28.09/22.04)	NR..ITPSWVAFtDTERLIG
   86-  104 (26.96/16.03)	NQaaFNPENTVF.DVKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.02|      11|      27|     228|     238|       3
---------------------------------------------------------------------------
  228-  238 (20.52/12.89)	LGGGTFDVSIL
  256-  266 (22.49/14.86)	LGGEDFDHRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     249.50|      66|     193|     153|     224|       4
---------------------------------------------------------------------------
  153-  219 (102.88/70.54)	LGKMKETAE.AYLGKKI.KDAVV................TVPAYFNDAQRQA.TKDAGAIAGLNVARIINEPTaAAIAYGLDKKGG
  342-  406 (91.72/57.50)	MGPVKKALEdAGLKKSD.INEIV................LVGGSTRIPKVQElLKD..MFDGKEPNKGIN.PD.EAVAYGAAVQGG
  429-  496 (54.90/23.27)	LG..IETVG.GVMTKLIpRNTVIptkksqifttyqdqqtTVSIKVYEGERSL.TKDCRELGRFDLSGIPPAP..............
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00732 with Med37 domain of Kingdom Viridiplantae
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