<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00682

Description Uncharacterized protein
SequenceMGQVGLPCGFQLICFWKMLWMELKLLQLVLLKFSLALQVVNGTTWHDTFLGLWIAALRLLQRERDPSEGPVPRIDSSLCMVLSVTTLTVADIIEEEESELIDETEQSPSNLPKDKQAPGRRRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMNGLATSCLGNMRHLIVEACIARNLLDTSAYLWPGYVNASDSNQVPCSIATQMSGWSSLMKGSPLTPSLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLVRGWSVQENTILFIIKLLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGWVPLLAAALMPICEVFGSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLTVDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKRWYRQNEECIASTLTGLVHGTSVHLIVDALLTKMFRKINRSGTPLTSATSGSTNSSGSGLEDVSIKLKVPAWDILEATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYFSAEVTRGLWKPAFMNGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAVGGNSPATLPLPLAALVSLTITFKLDKASDRFLALVGLGLSSLASSCPWPCMPIVASLWAQKVKRWNDFLVFSASGTVFHYNTDAVVQLLKSCFTSTLGLTSSHNYSNGGVGALLGHGFGSHFSGGISPVGPGILYLRVHRSVRDVMFMKEEILSILMHCVRDIASCGLPREKLEKLKKTKHGMRYGQVSLAAAMTRAKLAASLGASLVWISGGSSLVHSLLTETLPSWFISVHGLVQEGGESGCMVGMLGGYALAYFAVFCATFAWGVDSESRASKKRPTVLGTHLEFLASALDRKISVGCDCATWRAYVSGFVTLIVGCTPTWMLEINVDALKRLSKGLRQWDEEELALTLLGVGGVGAMGAAAQLIVESKI
Length1008
PositionTail
OrganismCitrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.08
Grand average of hydropathy0.264
Instability index42.70
Isoelectric point7.21
Molecular weight108701.99
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00682
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     153.50|      36|      71|     361|     396|       1
---------------------------------------------------------------------------
  307-  334 (29.20/14.68)	....VP....ADY...SGSEshLIGYAALLN..TLLVGISS
  361-  396 (67.80/44.55)	FGSSIPN...ASWTLSSGEE..FSCYAVFSNAFTILVRLWR
  432-  469 (56.50/35.81)	FGTS.PKdqmKSKRFSKNIK..FSTDPIFMDSFPKLKRWYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     322.21|      77|     274|     622|     702|       2
---------------------------------------------------------------------------
  539-  620 (107.37/55.47)	ILEATPfvLDaaLAACAHGRLSPRELATGLKEL.S.DCLPATLATVVSYFSAEVTRGLwkPAFMNGTDWPSPATNLSSIEQQIK
  622-  698 (128.85/68.79)	ILAATG..VD..VPTVAVGGNSPATLPLPLAALVS.LTITFKLDKASDRFLALVGLGL..SSLASSCPWPCMPIVASLWAQKVK
  705-  766 (85.99/48.65)	VFSASG........TV.FHYNTDAVVQLLKSCFTStLGLTSSHNYSNGGVGALLGHGF..GSHFSGGISPVGP...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     175.09|      59|     277|     192|     261|       3
---------------------------------------------------------------------------
  192-  261 (86.98/77.99)	EACIARNLldtsaylwPGYVNASDSNQVPCSIATQMsgWSSLMK.GSPLTpSLTNALVVTPASSLAEIE...KV
  472-  534 (88.12/52.14)	EECIASTL........TGLVHGTSVHLIVDALLTKM..FRKINRsGTPLT.SATSGSTNSSGSGLEDVSiklKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      30.35|      10|     556|     276|     289|       4
---------------------------------------------------------------------------
  276-  289 (10.45/16.19)	AATVlcGASLVrgW
  835-  844 (19.90/ 9.00)	AASL..GASLV..W
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00682 with Med33 domain of Kingdom Viridiplantae
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