<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00680

Description Uncharacterized protein
SequenceMTLVKSFSKTKKSSANAITANAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFARKRILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIISSKGKLQSSRPAASQPQMLSGDALIPKQPPLGERPSVIQPDSPRSVEIGRSDYSCDTDSHMQNSFNSESESDISDFSVPVSYQSTEISENIDFSSLSKSSKDHFPQSPKGLEAEIKRLRLELKQSMEIYNSVSKEAVSTSQTAVKLQQRKKEEALKLEEARLAEEAALALVKSERQKTRAAMEAALMAQRLVELEAMKREIAELKAMQEEEEKKIVMEAMAYKNVRYRKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDNIVVTPGPYNSVSEMKQVSGNNMRNH
Length701
PositionTail
OrganismCitrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.06
Grand average of hydropathy-0.347
Instability index48.19
Isoelectric point7.19
Molecular weight77947.05
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00680
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.39|      18|      22|     153|     171|       1
---------------------------------------------------------------------------
  153-  171 (25.95/18.60)	IISSKGKLqSSRPAASQPQ
  178-  195 (33.45/19.62)	LIPKQPPL.GERPSVIQPD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     161.27|      38|      39|     237|     274|       2
---------------------------------------------------------------------------
  198-  232 (49.92/29.54)	RSVEIGRS.DYSCDTDS...HMQNSFNSeSES.DISDFSV
  237-  274 (60.71/37.40)	QSTEISENIDFSSLSKSSKDHFPQSPKG.LEA.EIKRLRL
  278-  316 (50.64/30.07)	QSMEIYNSVSKEAVSTSQTAVKLQQRKK.EEAlKLEEARL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.38|      26|      51|     407|     454|       3
---------------------------------------------------------------------------
  407-  433 (40.64/53.55)	YGPVYKAQLDHTSVAIKVLGPDISQgP
  461-  486 (47.75/18.19)	YGCLVYEYMENGSLEDRLFQKDNSP.P
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00680 with Med32 domain of Kingdom Viridiplantae
Unable to open file!