<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00664

Description Uncharacterized protein
SequenceMANQSKEMMEEESCLLSAAAFEERVIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSVVELGEVLVSYLCFQNNHPSLWKFLDYALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLELLSRYALNFHAVASEDCNVKIIESIEACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSLFEDMGLQVGPLDQQSMEIDSIGNFCVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLLRLIHFNMPESFNGLLQRLQFLEANKLESSKLKTVSQLLARLCDNVRNVPSYDYKLNKHRFIGMLIDTKSLRPMRSCNSESSWSSCWLSFDIFMENSMDGKQLPVTSAIIVLTRIITTLRVLNRASWQETFLALWLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAEQANIQLSTLQGSKTSGSIETGCGHGMEEKSLASKKEGLVSSLQALGNFSALLCPPASVACEANNAAAKAASFISVSKNMKDGICSGSPSETLLNSGGNMRHLIVEACIARNLIDTSAYYWPGYVSASVIAVNEFSPVQKSPWSMFMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEERSAAAKILCGASLARGWNIQEHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGASSVDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPSVYMVFSCAFLFLVRLWKFYRSPHELCLSGGTLAGELTLEYLLLLHNSHIASRTSAAQSERNSNLDQLDTVSDDPIYIDHFPKLRAWYCQNKTCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGASSSNSSTPPSGSASESPACTGEDAYQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRELVDFLPASIATIISYFSAEISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSVPCCSAGTSPLTLPLPVAVLVSLTITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGSLWAQKVRRWHDFIVVSCSRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLLGSVVAARAVCPSLAPGYLYLRSCRTIHNVQHVNDVIVGLVAEFAREAAAKWASSDLPRLKSSQASLSLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGKVSAVAHIMEGYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPATWRAYVSCLVGLVVSSAPAWIQEVRPETLRKLASGLRGWHECELALSLLERGGIGSIPSVMELLHVIN
Length1328
PositionTail
OrganismCitrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.07
Grand average of hydropathy0.176
Instability index52.93
Isoelectric point7.01
Molecular weight145306.48
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00664
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     229.60|      73|      97|    1118|    1195|       1
---------------------------------------------------------------------------
 1118- 1195 (106.11/74.70)	GLVAEFarEA.AAKWASSDLPRLKSSQasLSLaTSKARE.VASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGK
 1217- 1291 (123.49/71.73)	GLIWGF..EAkMPSWAVSRRRYLIGTH..FEY.LSRALEgNIKLGCDPATWRAYVSCLVGLVVSSAPAWIQEVRPETLRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.94|      20|      97|      49|      70|       2
---------------------------------------------------------------------------
   49-   70 (31.76/30.55)	CL...KSGSGSVVELGEVLVsyLCF
  147-  169 (32.18/22.27)	CLqlsRTYNVRVVEFGHALV..LSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     250.98|      61|     135|     647|     707|       4
---------------------------------------------------------------------------
  607-  645 (53.54/31.01)	.........ILCGASL..ARGWNI.QEH.VVRFVVKLLSPPIPP.GYTGP....RSH......
  647-  707 (103.34/67.64)	VDHMPMLTAIFFGASS..VDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPS
  784-  844 (94.09/60.84)	IDHFPKLRAWYCQNKTciASTLSGLCSGNPVHQVANKILSM..IYSKMTKTGASSSNSSTPPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.58|      15|      29|     868|     882|       6
---------------------------------------------------------------------------
  868-  882 (23.01/13.97)	EVLEAIPFVLEAILS
  900-  914 (23.57/14.50)	ELVDFLPASIATIIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.68|      23|      45|     952|     974|       7
---------------------------------------------------------------------------
  952-  974 (42.26/24.60)	ILAAVGVSVPCCSAGTSPLTLPL
  995- 1017 (44.42/26.27)	IHAVIGPALENCAAGCSWPCIPI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00664 with Med33 domain of Kingdom Viridiplantae
Unable to open file!