<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00634
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MLRLNVLAKWCQQVPLIHYSQQLASTLSSHDTCFTQAADSLFFMHEGLQQARAPIYDVPSAIEVFLTGSYQRLPKCIEDMGMQSTLTKDQQKAALKKLDTLVRAKLLEVSLPKEISEVKVSSGTALLRVDGEFKVLVTLGYRGHLSMWRILHLELLVGERSGPVKLEESRRHVLGDDLERRMSAADNPFITLYSILHELCVALVMDTVIRQVQALRQGRWKDAIRFELISDGSMGHGASGSSIQPNQDGEVDSAGLRTPGLKLIYWLDFDKNPGSSDSGSCPFIKIEPGPDLQIKCLHSSFVIDPLTGKEAEFALDQSCIDVEKLLLRAISCNRYTRLLEIQKELGKNIQICRAPSDVVLQSFMDELDADNRKKDNKSEFRDYEGQEVLRVRAYGSSFFTLGINIRNGLLSDCEEALNQGSTSAAEVFISLRSKSILHLFAAIGRFLGLEVYDHGFASMKVPKNLVNGSTVLLMGFPDCGSSYFLLMELDKDFKPMFKLVETQPDQSEKGQSSSDLNRVIRIKQIDISQMQILEDELNLSILNQGNLLSVMPNADGANHTSEQGLISEFNLDGSMHIAGCPLSSFSSVVDEVFEFEKGPAASSYTLQNVSSSFTTSSASHFGSLQMNLHGVKAGTPSPRWEGGVQMSHLNVAKGSIGNTQYNGSLYSSSNVKGPVQSSSFSSLSSGLARSTAVKKLPASKSDQDLASLRSPHSIEIGTVEEDLVSVGRSSRLLSPPRTASVRAPPPSAKPNGPRSSVTGSLAGSIKVAGSSSLASPPVSHAADTDIVSKHDKHPRKRTVSDMLSLIPSLQDIEAATGLSNKRRKISESAHFQQPLSGGLISAEIVSKAERYSYGNLVAEANKGNAPSSTYISALLHVVRHCSLCIKHARLTSQMELLDIPYVEEVGLRSASSNIWFRLPFARGYTWRHICLRLGRPGSMHWDVKINDQHFRDLWELQKGSNSTPWGSGVRIANTSDIDSHIRFDPEGVVLSYQSVEDDSIKKLVADIQRLANARMFALGMRKLLGVRADEKPEEGTANFDVKAPVGGKGASEASDKLSEQMKRAFRIEAVGLMSLWFSFGSVVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGAEVASLLDCIRLTAGPLHALGAATRPARAGTGPGVPGVATAVSTIPKQTGYSSSQGLLPNGSTTNVSQVTSAPTGLNVSQVTSASTGNPVGAASTVPLGNPNLHGAAMLAAAGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKHFAVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQELNGLDSNITGGQQTVGMANTNPSSGSQLASANGSRVNIPSSAAMSRAVNQVAALNRVGNPMPGSSNLSVVSSGLPIRRSPGASVPAHVRGELNTAIIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHQQQQQQQQQNSSTAQEELTQSEIGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQTQGGEIAPSQKPRIELCLENHSGFNVDDGSVNSSASKSNIHYDRPHNSVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENPNVSFLGMEGSHGGRACWLRTDEWEKCKQRVARVVEVNPVSAGDLTQGRLRIVADSVQRTLHMCLQGLKDGGTVTASSVGV |
Length | 1749 |
Position | Tail |
Organism | Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.151 |
Instability index | 45.69 |
Isoelectric point | 7.90 |
Molecular weight | 189262.14 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | core mediator complex GO:0070847 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IBA:GO_Central
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP00634
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 426.34| 108| 256| 1284| 1422| 1
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573- 687 (104.77/39.52) .....GSMHIAG...CPlsSFS.SVVDE..VFEFEK..GPAASSYT..LQNVSSSFTTSSAshfGSLQMNLHGVKAGTPSprwegGVQMSH.LN..VAKGSIGNtqyngslysssnvkgPVQ.SSSFSSLS..SGL....
690- 797 (135.24/52.89) STAVKKLPASKSDQDLA..SLRsPHSIEigTVEEDLvsVGRSSRLLSPPRTASVRAPPPS........AKPNGPRSSVTG.....SLAGSIKVAGSSSL..ASP...............PVSHAADTDIVSkhDKHPRKR
1284- 1391 (186.33/118.09) ATPPKGGPSVGGSLPCP..QFR.PFIME..HVAQEL..NGLDSNITGGQQTVGMANTNPSS...GSQLASANGSRVNIPS.....SAAMSRAVNQVAALNRVGN...............PMPGSSNLSVVS..SGLPIRR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.79| 19| 256| 1394| 1422| 2
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1403- 1422 (34.51/36.30) GElNTAIIGLGDDGGYGG..GW
1666- 1686 (36.28/14.08) GE.NPNVSFLGMEGSHGGraCW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.16| 25| 256| 116| 140| 3
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116- 140 (40.09/23.70) SEVKVSSGTALLRVDGEFKVLVTLG
378- 402 (44.06/26.75) SEFRDYEGQEVLRVRAYGSSFFTLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 116.03| 36| 256| 244| 316| 4
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261- 304 (57.78/81.33) LKLIYWldfDKNPGSSDSGscpfiKIEPGPDLQIK.CL..HSSFVID
1568- 1606 (58.25/16.85) LKLIAW...KKGLAQTQGG.....EIAPSQKPRIElCLenHSGFNVD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.59| 18| 256| 546| 568| 5
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549- 568 (27.77/25.54) SVMPNADGanHTSEQGLISE
1163- 1180 (32.82/14.37) STIPKQTG..YSSSQGLLPN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 266.44| 72| 164| 889| 961| 8
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889- 961 (130.76/98.69) RLTSQMELLDIPYVEEVGLRSASSNIWFRLPF.....AR.GYT..WRHIC.LRLG.RP..G.SMHWDVKiNDQ...HFRDLWELQKGSN
982- 1042 (56.70/35.51) RFDPEGVVLSYQSVEDDSIKKLVADIQ.RLAN.....AR.MFAlgMRKLLgVRADeKPeeG.TANFDVK....................
1056- 1122 (78.97/53.31) KLSEQMK..RAFRIEAVGLMS....LWF..SFgsvvlARfVVE..W......ESG.KE..GcTMHVS...PDQlwpHTKFLEDFINGAE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.88| 13| 45| 1149| 1161| 11
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1149- 1161 (26.63/14.46) AGTGPGVPGVATA
1192- 1204 (20.25/ 9.02) APTGLNVSQVTSA
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