<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00630

Description Uncharacterized protein
SequenceMWQPKGNGVKKTGGNGLIAVAVDKDKSSQHALKWAADNLLNRGQTVVLIHVAQRTSVSSVSSQSQVYDASATTNPHQKQPDKQIRDLFLTFRCYCTRKDIKCFDVLLEDVDIVKAITEYVSFAAIEDLVLGAPSRHGFIRKFKADVPSSVSKAAPDFCNIYVVSKGKISSKRNASRSAPFTSPLLDQLQSQNDISDTQSRYSMNLRDRTSFKPRMSFEESAKSPARGRGFDRKSFMDSSESDTDISFVSSGRPSSDHSPSMHYEFVDVGRNSRISTSSEHSLGSFRLGLRYNDRSSPYDLSSISQDSGATSCSCSSQNLDEVEAEMRRLKLELKQTMDMYSTACKEALVAKQKALELQRWRLDEERRLEEARFAEETALSLAEKERARCKAAVEAAEAAKRIAELEAQRRLSAEMNRLKESDEVKIASSNLSTKDLRYRRYTIEDIEEATQFFTESRKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQREIEVLSCIRHPNMVLLLGACPEYGIIVYEYLANGSLDDRIFRRGNTPPLSWQQRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLVPAVAENVTQYHLTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLITAKQPMGLTHFVERSIENGTLGEMLDPTVTDWPFEETLGFAKLALQCSELRRKDRPDLGKVVLPELNRLRELADESMGQTFFGGSLGPSSKSNASMTMQDVLSDPQPWNSESLKSQSGSSSHLEKPSEQPEES
Length782
PositionTail
OrganismCitrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Sapindales> Rutaceae> Aurantioideae> Citrus.
Aromaticity0.07
Grand average of hydropathy-0.500
Instability index52.11
Isoelectric point6.61
Molecular weight87369.54
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00630
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     153.78|      47|      49|     350|     397|       1
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  317-  348 (25.11/13.23)	..................QNLDEVE.AEMRRLKLELKQ.TMDmystaCKE....AL
  350-  397 (70.53/60.78)	AKQKA.LELQRwRLDEE.RRLEEARFAEETALSLAEKE.RAR.....CKAAVEAAE
  399-  447 (58.14/42.68)	AKRIAeLEAQR.RLSAEmNRLKESDEVKIASSNLSTKDlRYR......RYTIEDIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.03|      25|      53|     170|     195|       2
---------------------------------------------------------------------------
  181-  229 (26.76/11.42)	TSPLLDQLQSQNDISdtqsrysmnlrdrtsfkprmsfeeSAKSPARGRG
  232-  259 (38.27/14.04)	RKSFMDSSESDTDIS.....................fvsSGRPSSDHSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     143.02|      47|      51|     482|     532|       3
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  482-  532 (65.93/62.05)	LRPDAAQGRSqFQREIEVLSCIrHPNMVLLLGACPEygIIVYEYLANGS..LD
  536-  584 (77.09/52.97)	FRRGNTPPLS.WQQRFRIAAEI.ATGLLFLHQTKPE..PLVHRDLKPGNilLD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00630 with Med32 domain of Kingdom Viridiplantae
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