Description | Putative transcription mediator subunit Med12 |
Sequence | MGVQPRPPQQRTVSSSGLSVQRPTHQRTLSAQYLPQSPVRKETPIDLTGDANGAAVAQNRYGSLPRRGGSRLKLELSNDAMLAQHPITDSPKTLTPSRLMPKNDPSNLAEMGSPSSAKGQPIDADNPPMPMPKRRPRFVARPAAKDSPAPTVAIKKDGRPKAWHFETPAAAPRYAPFNKQRNDATNKPGFGGSGTGTRDASEIGYADFFPWNGNHPEDQYSETVIKTGYYDKPPASSASETSSAKAVLFPALKHKSGLNLLSSIFVGVLNQRKLNGQILSPSTFKPPPRVTLTDTKREMWLRDLANPSISLRRLSRTIPHGIRGKVLLDHCLNKNVPTERAVWLVKCVGANEIRAFKRKGNGPGPFVLGGEAKWLRDWTVFVEQFMEGVSTAFGDNDWKVKVQYAIRLATHLYAEQLLDRDHYMDWLVSGLENSTQSKLPMWILITQIYWKDLLRLRKYGRRLVNALLSHLHTIHNDPDRDILVQLSARLATLLTPLLSAHPDNFVSPATWFKYRDALLASIPTDHEFAQTAYKSINMRNEQLVASASNSQPANRQILVKHLDTTYTSLYSPDLAAQCWAVSEDKNMIVRTLLEWCTSPHRPGAAKVYITAGLLRAWVAVGVDVTTAVLEYLSSNPPTETNSKRVFHRLMSEIVRTGDFQLQGYIFWLIARGGLRRPADTEADGSCATRLLVDLPLHALNSTSRTTRSSLLRRASYDVKEEAEDINMAIKCIDHALGLPLQPGDPMLQRKPVPVGKLCRLIANSNRALQTEVGARLLQIFTTEIVMTKNGPQVSPAMFNFARAVLEAAADFSALAEIIKLVVRASNPEILASCADTINVHLPIFAALGGPKELFDLLMERLKVVSEEQGPAARPLLASLANLAARLPGFTNTASYLRQQLHQCDRNNPIDACSPVSDNMTAQLQDAEGELHEEIEKLLTSGTSVDRPTMDRLFQTVVGRLESSWSNSPDRQRAYSALLGRLRIFDTQHFDVRMTDWVHHISALKARPALVDIYPLLISMGCLTLPIVLTTTSIDAGRIALNPSGPTNSTTTYMQEVLHLTTMPLTAKTALTPEETYRFYIQQQVVPRQNHKDMVLLVRNALIEYSRLQGAADLALLPLADPSFMNSVLELLKFLVLRDPPSVVQALGTKTPEPALTNVFAQITSKLLLPDASDESPLTFETVLELANEFTLPFCQLKLSIGLSADSATSPGGGEQALTQFDMFSRAMDRAVSANNVMWTSMLPYLSEEITEHLKKQAHLRFLGLFPSQKNPPASDPLSLESIQLAGSLLSVVEAILRGRPAARTSQLTSGMVEKLAELWEILAAGDDDKRELQSSTLRYWLPALLRFITLHTTANEPMSAPAQVQVTNNMKPPVNAAAFEIRARILVILSGLTLELDALALQDPHTGRTLSQQVFDLALLLIDTLPEDSRLQCVRVLLTGGTMQNPASSDARLQYLFSHMPPQTEQFVLAHRQQTATQQQQTGPPRQKIPISMQGTGKITPFVYRKWEMLSEPTPNVGENDTALSLTLFEAIKIQ |
Length | 1535 |
Position | Kinase |
Organism | Colletotrichum sublineola (Sorghum anthracnose fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Glomerellaceae> Colletotrichum> Colletotrichum graminicola species complex. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.229 |
Instability index | 44.02 |
Isoelectric point | 8.91 |
Molecular weight | 169750.70 |
Publications | PubMed=24926053 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP00609 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 273.66| 95| 238| 865| 968| 1 --------------------------------------------------------------------------- 77- 127 (50.57/21.49) SNDAMLAQHPITDSPKTLTpSRLmP..KNDPSNLAEMGSPSSaKGQPIDADNP.................................................. 865- 964 (149.88/102.84) SEEQGPAARPLLASLANLA.ARL.PgfTNTASYLRQQLHQCD.RNNPIDACSPVSDNMTAQLQDAEGELHEEIEKLLtSGTSVDRPTmdRLFQTVVGRLESSW 1264- 1319 (73.20/33.06) .....................................LFPSQ.KN......PPASDPLSLESIQLAGSLLSVVEAIL.RGRPAARTS..QLTSGMVEKLAELW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 272.86| 67| 238| 363| 431| 2 --------------------------------------------------------------------------- 286- 348 (66.88/44.14) PPPRVTLTDTKremW.....LRDLanpS.ISLRRLSRTIP.............HGIRgkvLLDH.....CLNKNVPTEravWLVKCV 363- 431 (116.40/90.31) PGPFVLGGEAK...W.....LRDW...T.VFVEQFMEGVSTAFGDNDWKVKVQYAIR...LATHLyaEQLLDRDHYMD...WLVSGL 440- 507 (89.59/62.09) P.MWILITQIY...WkdllrLRKY...GrRLVNALLSHLHTIHNDPDRDILVQLSAR...LATLL..TPLL..SAHPD...NFVS.. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 119.77| 36| 552| 543| 614| 3 --------------------------------------------------------------------------- 564- 603 (61.51/97.92) TTYTSLY...SPDLAAQcwavSEDKNMIVRTLLEWCTSPHRPG 705- 743 (58.25/21.44) TTRSSLLrraSYDVKEE....AEDINMAIKCIDHALGLPLQPG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.63| 13| 15| 1| 14| 4 --------------------------------------------------------------------------- 1- 14 (21.89/14.87) MGVQpRPPQQRTVS 18- 30 (24.74/11.67) LSVQ.RPTHQRTLS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 120.46| 36| 552| 795| 849| 5 --------------------------------------------------------------------------- 658- 698 (59.26/30.31) DFQLQGYIFWLIARGglrrpADTEADGSCATRLLVDLPLHA 810- 845 (61.21/39.29) DFSALAEIIKLVVRA.....SNPEILASCADTINVHLPIFA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 127.73| 38| 823| 606| 648| 7 --------------------------------------------------------------------------- 606- 648 (59.55/50.02) KVYITAGLLRAWVAvgvdvTTAVLEYLSSNPPTETNSKRVFHR 1435- 1472 (68.18/45.21) RVLLTGGTMQNPAS.....SDARLQYLFSHMPPQTEQFVLAHR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 106.40| 33| 1013| 157| 192| 8 --------------------------------------------------------------------------- 157- 192 (56.85/50.30) DGRPkaWHFET..PAAAPRYAPFNKQR......NDATNKPGfGG 1173- 1213 (49.55/32.17) DESP..LTFETvlELANEFTLPFCQLKlsiglsADSATSPG.GG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 229.42| 75| 321| 1026| 1108| 9 --------------------------------------------------------------------------- 1026- 1108 (113.52/88.83) IVLTTTSIDAG......RIALNPSGPTNSTTTYMQE....VLHLTTMPLTAkTALTPEETYRfYIQQQVVprqnhkDMVLLVRNALIEYSRLQ 1348- 1432 (115.89/69.42) ITLHTTANEPMsapaqvQVTNNMKPPVNAAAFEIRArilvILSGLTLELDA.LALQDPHTGR.TLSQQVF......DLALLLIDTLPEDSRLQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 99.04| 31| 513| 252| 284| 10 --------------------------------------------------------------------------- 252- 284 (44.63/41.22) LKHKSGLNLLsSIFVGVLNQRKlNGQILSPSTF 768- 798 (54.41/39.31) LQTEVGARLL.QIFTTEIVMTK.NGPQVSPAMF --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FVYRKW 2) RRPRFVARPAAKDSPAPTVAIKKDGRPKAWH | 1502 134 | 1507 164 |
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