<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00594

Description Uncharacterized protein
SequenceMSLRPPSIAGAPASAVQHARMGGTTGLVAPGPGLGSGAVVTAKKGVAPVQQLQMLHKRLGQLSRSIQELQNLMFSHPTLEDWPTLCSRYATLLSQLHSITASLTSPAPQFLSHQTTELANLLATESTTANLYAGQPVGTLLGAVGVEPDQLPRVRYRDATTVTASAPGSASPSASTNVHASASAVRSGPASTAAGRATATAGGAGPSGSAISIGNPLPALVVHPVQPLEDEQQIALLVNALLRTRLEPELEARREAQMRAVLADGRAHARARRRGGRAAATAAAAGDEHGEEGGADLLRDVRMQVEAHDQVVLTALRMWYHLERAPDEFGETYDWKMRISGGDDAVSGDEEEEDGTDEDGQDQKPAVATKDGDGDAIMQVQDESATAAVENGTSKLATLILWSPQQAVAYLSRGIKPS
Length418
PositionHead
OrganismTilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Georgefischeriales> Tilletiariaceae> Tilletiaria.
Aromaticity0.03
Grand average of hydropathy-0.277
Instability index45.71
Isoelectric point5.41
Molecular weight43618.22
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00594
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      59.00|      12|      14|     182|     193|       1
---------------------------------------------------------------------------
  166-  177 (19.31/ 8.18)	APGSASPSASTN
  182-  193 (20.38/ 9.08)	ASAVRSGPASTA
  199-  210 (19.32/ 8.19)	ATAGGAGPSGSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.16|      12|      19|     361|     372|       5
---------------------------------------------------------------------------
  361-  372 (20.72/14.20)	QDQKPAVATKDG
  381-  392 (19.44/12.86)	QDESATAAVENG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.22|      17|      47|      62|      78|       6
---------------------------------------------------------------------------
   62-   78 (30.51/17.02)	LSRSIQELQNLMFSHPT
  111-  127 (27.72/14.97)	LSHQTTELANLLATEST
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00594 with Med8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARREAQMRAVLADGRAHARARRRGGRAAATAAAAGDEHGEEGGADLLRDV
2) PRVRYRDATTVTASAPGSASPSASTNVHASASAVRSGPASTAAGRATATAGGAGPSGSA
3) SGGDDAVSGDEEEEDGTDEDGQDQKPAVATKDGDGDAIMQVQDESATAAV
252
152
340
301
210
389










Molecular Recognition Features






MoRF SequenceStartStop




1) ILWSPQQAVAYLSRGIK
400
416