<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00585

Description "Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative isoform 2"
SequenceMPEDMEISRSPFTRGHIKYEPSIPDCDISFVSSGRPSTDRMFPSLYDNLEYGTPRLSVSSDYDNRSFGSSYSGNRSMDFSSSQYELSSSSLESGRTSWSSQNMDDVEAEMRRLRQELKQTMDMYSAACKEALTAKQRAKELHSWKLQEEQKIEEARLSEEAALSLAEKEKAKCKAAIEAAQAAQRIAELEAQKRINAEKKASKEADERKMAKKSLGHDLRYRRYTIEEIEAATEHFSPSRKIGEGGYGPVYKCNLDHTPVAIKVLRPDAAQGESQFHQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGNLEDRLFRRNNTPVLPWQVRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYHMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGILLLQIITAKPPMGLTHHVEHAIENGSFTGILDPAVLDWPVEEALIFAKLALKCSELRRKDRPDLGQVVLPEFNRLRALGEENMPFITPGGSAGPSPNHSQASTSSNQDFLSDPQSLQSGYDSSRSRSNTSSFIGRR
Length563
PositionTail
OrganismTheobroma cacao (Cacao) (Cocoa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
Aromaticity0.07
Grand average of hydropathy-0.547
Instability index59.97
Isoelectric point6.12
Molecular weight63017.34
Publications
PubMed=23731509

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00585
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.16|      41|      43|      97|     139|       1
---------------------------------------------------------------------------
   97-  139 (65.84/55.68)	SWSSQNMDDVEAEmrRLRQELKQTM.DMYSAACKEALTAKQRAK
  143-  184 (61.33/44.32)	SWKLQEEQKIEEA..RLSEEAALSLaEKEKAKCKAAIEAAQAAQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     201.32|      59|     484|      12|      75|       4
---------------------------------------------------------------------------
   12-   75 (103.80/54.81)	FTRGHIKYEPSIPdcdisFVSSG...RPSTDRMFPSLYDNLEYGTPRLSVSSDYD...NRSFGSSYSGNR
  499-  563 (97.52/43.41)	FNRLRALGEENMP.....FITPGgsaGPSPNHSQASTSSNQDFLSDPQSLQSGYDssrSRSNTSSFIGRR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00585 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MPFITPGGSAGPSPNHSQASTSSNQDFLSDPQSLQSGYDSSRSRSNTSSFIGRR
510
563










Molecular Recognition Features






MoRF SequenceStartStop




1) DRMFPSLYDNLEYGTPRLS
2) ISRSPFTRGHIKYEPSIPDCDISFV
3) SFIGRR
39
7
558
57
31
563