<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00580
Description |
Sensitive to freezing 6 |
Sequence | MNQQQGSGNNKDPEEEPVTQSVVDSTVKTGPDRPVAPEPVAVTGEDEVVTSSEKTEDTPMEDDSVNPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPSQGPAHLVRDASCWQREHEWRQDIAVVTKWLSGVSLYRWLSSKSSNPANSKSTFEEKFLSQQSQNSARWPNFLCVCSVFSSGSVQLHWSQWPPTQGSTARKWFCTSKGILGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATAKTSTSSGIPPSVNPPNWAGFAPLAAYLFSWQEYLISEAKQGKKSTDQDFNDAASLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPTITGWRVQRWESSLQPVVIHHIFGNPSSSFGGQAPMQTVWVSKVDTSIPPTNDFKIQQAAAAGPTPDVRKASDLSAEKAKRVSFDPFDLPSDVRTLARIVYSAHGGEIAISFLRGGVHIFSGPDFTAVDNYQINVGSAIAAPAFSSTSCCSASVWHDTSKDRTILKIIRVLPPAVSSSEIKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVSEPWHASGETLASIDLEAMAVDPALVPSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVNAGSGSNRNMVASPTQSSATPATSQAGQSGTTSSTGSTQMQAWVQGAIAKISSSTDGVANSTPTISGPSTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQHPRCAQRTADANHQKSQPGAPGKMEEVNSVSVKPTTTMTRSDEAQGSRTGQVVPGAKGFEEGPAGRLKMGSGNAGQGYTFEEVKVLFLILMDLCRRTAALAHPLPVSQVGSSSIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDMGPIDDSPRLSNSIDSIDMSSLENFDGYYGAQTLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGSTSQRSQNERETWWISRWAHGCPMCGGTWVRVV |
Length | 1249 |
Position | Tail |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
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Aromaticity | 0.08 |
Grand average of hydropathy | -0.214 |
Instability index | 44.89 |
Isoelectric point | 6.24 |
Molecular weight | 135022.52 |
Publications | PubMed=23731509
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:EnsemblPlants
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GO - Biological Function | |
GO - Biological Process | circadian regulation of gene expression GO:0032922 IEA:EnsemblPlants
positive regulation of plant-type cell wall cellulose biosynthetic process GO:2001011 IEA:EnsemblPlants
positive regulation of systemic acquired resistance GO:1901672 IEA:EnsemblPlants
regulation of cell wall pectin metabolic process GO:1902066 IEA:EnsemblPlants
regulation of ethylene-activated signaling pathway GO:0010104 IEA:EnsemblPlants
regulation of jasmonic acid mediated signaling pathway GO:2000022 IEA:EnsemblPlants
regulation of long-day photoperiodism, flowering GO:0048586 IEA:EnsemblPlants
regulation of transcription, DNA-templated GO:0006355 IBA:GO_Central
response to osmotic stress GO:0006970 IEA:EnsemblPlants
root development GO:0048364 IEA:EnsemblPlants
trichome branching GO:0010091 IEA:EnsemblPlants
trichome papilla formation GO:1905499 IEA:EnsemblPlants
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Interaction
Repeat regions
Repeats |
>MDP00580
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1161.16| 389| 420| 76| 494| 1
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6- 271 (339.23/185.54) ..........................................................................................................................................................................G.SGNNKDPEEEPVTQSVVDSTVKTGPD.RPVAP.EP.....VAVTGEDevVTSSEKTEDtPMEDD.SV...NPATVFciRLKQPRSNLQ.HKM..SVPElCRNF..SAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADS.PRDSVQFIewsptSCPRALLIANFHGRI.TIWTQPSQGPAHLVrDASCWQREHEWRQDIAVVTKWLSGVSlyrwlSSK.SSNPANSKSTFEEKFLSQQSQNSARWPNFLCVCSVFSSGSVQLH
272- 686 (621.33/345.41) WSQWPPTQgstARKWFCTS....KGILGAGpSGIMAADAIITDSGA.....MHVAGV..PIVNPSTVVvwevtpgpGNGFQATAKTSTSSGIPP.SVNPpnwaGFAP.LAAY...LFSWQEYLISEAKQgKKSTDQDFNDAAsLHCSPVSNFSAYVSPEAAAQSAATTTWG.SGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEG.....PTITGWR..VQRWESSLQ.PVVIH.HIF.GNPSSSF..GGQAPMQTVWvSKVdtSIPP.TNDFkiQQAAAAGPTPDVRKASDLSAEKAKRVSFDPFDLPSDVRTLARIVYSAHGGEIAISfLRGGVHIF.....SGPDFTAVDNYQINVgSAIAAPAFSSTSCC.SASVWHDTSKDRTILKIIRVLPPAVS.....SSEiKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLN
696- 912 (200.59/92.06) FHSLPSIQ...HRQQYGPSldriKCRLLEG.TNAQEVRAMVLDMQArllldMLGKGIesALVNPSALV........SEPWHASGETLASIDLEAmAVDP....ALVPsIQAYvdaVLDLASHFITRLRR.YASFCRTLASHA.VNAGSGSNRNMVASPTQSSATPATSQAGqSGTT......SSTGSTQMQAWVQGAIAKISSSTDGvanstPTISG........PSTFM.PISINtGTFpGTPAVRL..IG............................................................................................................................................................................................................
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