<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00565

Description "Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative isoform 1"
SequenceMWTPNRYASSAKKGVGNGLVAVAIDKDKGSQHALRWAVENLLSRGQTVILIHVVNKAASVTHVASTAVVCDINLPLSNKQMAEKLSKDLFLTFHCYCTRKDIHCLDIILEDTDIVKALTEYVSYAAIEKLVLGAPARSGFMRKFRADIPSCVSKLSPDFCTVYVISKGKVSSVRNASRSAPHSSPLLDEIKKQNTDSVDKPFLHSGSVKGADRMVKPRTSVDRASRSPYPGARPSLMKAFGDFSESDTDISFVSSERPSTDRNSSVFFDSFVDSSRNSRISSSTDHSIGSMRLGIKWSDRTTPHEFSSVSQESGRSSCSSQNLEEVEAEMRRLRLELKQTMDLYSNACREALSAKQQAMELNRCKHQEEQRLEEARLAEEAAMSAAEKERVKCQEAVQAAEAAQKVAESESLRRLKIDGETLRETVEMKKMLDTLSRSNIKYRRYSIEEIEQATDGFACSRKIGEGGYGPVYKCYLDHTSVAVKVLRPDAAQGRLQFLQEIEVLSCIRHPNMVLLLGACPEYGILVYEYMGKGSLDDCIFRRANTPAMSWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLDHNYVSKISDVGLARLVPAVAENVTQFRVTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLITAKPPMGLTHYVERAIEKGTFFTEMLDPAVTDWPAEETLSLAKLALQCAELRRKDRPDLGKEVLPELCRLRDIAEEKMNHFFFAHSAGPSPNHSQVSSISQEAKSDAYQVENSTSSKTEEEKSDKD
Length779
PositionTail
OrganismTheobroma cacao (Cacao) (Cocoa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
Aromaticity0.07
Grand average of hydropathy-0.372
Instability index51.28
Isoelectric point7.02
Molecular weight86731.68
Publications
PubMed=23731509

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00565
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.86|      40|     121|     600|     643|       1
---------------------------------------------------------------------------
  600-  643 (62.81/61.29)	LARLVPAVAENVTQFRVTSTAGTfcyiDPEYQQTGMLG..VKSDVY
  720-  761 (67.05/51.38)	LCRLRDIAEEKMNHFFFAHSAGP....SPNHSQVSSISqeAKSDAY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.32|      14|     121|     173|     197|       2
---------------------------------------------------------------------------
  173-  188 (20.42/ 9.43)	VRNASRSA.PHSSplLD
  208-  222 (19.90/13.31)	VKGADRMVkPRTS..VD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.74|      28|     296|     352|     424|       3
---------------------------------------------------------------------------
  311-  339 (41.99/72.98)	QESGRSSCSSQNLEEVEAeMRRLRLE...LKQ
  394-  424 (37.75/13.24)	QEAVQAAEAAQKVAESES.LRRLKIDgetLRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     144.61|      42|      42|     225|     266|       8
---------------------------------------------------------------------------
  225-  266 (71.97/48.15)	SRSPYPGARPSLMKAFGDFSESDTDISFVSSERPSTDRNSSV
  268-  309 (72.65/48.68)	FDSFVDSSRNSRISSSTDHSIGSMRLGIKWSDRTTPHEFSSV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00565 with Med32 domain of Kingdom Viridiplantae
Unable to open file!