<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00563

Description "Kinase protein with adenine nucleotide alpha hydrolases-like domain, putative isoform 2"
SequenceMWTPNRYASSAKKGVGNGLVAVAIDKDKGSQHALRWAVENLLSRGQTVILIHVVNKAASVTHVASTAVVCDINLPLSNKQMAEKLSKDLFLTFHCYCTRKDIHCLDIILEDTDIVKALTEYVSYAAIEKLVLGAPARSGFMRKFRADIPSCVSKLSPDFCTVYVISKGKVSSVRNASRSAPHSSPLLDEIKKQNTDSVDKPFLHSGSVKGADRMVKPRTSVDRASRSPYPGARPSLMKAFGDFSESDTDISFVSSERPSTDRNSSVFFDSFVDSSRNSRISSSTDHSIGSMRLGIKWSDRTTPHEFSSVSQESGRSSCSSQNLEEVEAEMRRLRLELKQTMDLYSNACREALSAKQQVQAMELNRCKHQEEQRLEEARLAEEAAMSAAEKERVKCQEAVQAAEAAQKVAESESLRRLKIDGETLRETVEMKKMLDTLSRSNIKYRRYSIEEIEQATDGFACSRKIGEGGYGPVYKCYLDHTSVAVKVLRPDAAQGRLQFLQEIEVLSCIRHPNMVLLLGACPEYGILVYEYMGKGSLDDCIFRRANTPAMSWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLDHNYVSKISDVGLARLVPAVAENVTQFRVTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLITAKPPMGLTHYVERAIEKGTFFTEMLDPAVTDWPAEETLSLAKLALQCAELRRKDRPDLGKEVLPELCRLRDIAEEKMNHFFFAHSAGPSPNHSQVSSISQEAKSDAYQVENSTSSKTEEEKSDKD
Length781
PositionTail
OrganismTheobroma cacao (Cacao) (Cocoa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
Aromaticity0.07
Grand average of hydropathy-0.370
Instability index51.08
Isoelectric point7.02
Molecular weight86958.94
Publications
PubMed=23731509

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP00563
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.29|      38|      40|     218|     257|       1
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  172-  208 (51.37/31.60)	..SVRNASRSA.PHSSP.LLDEIKKQNTDSVDKPFLhSGSV
  218-  257 (58.70/47.13)	RTSVDRASRSPyPGARPsLMKAFGDFSESDTDISFV.SSER
  263-  276 (25.21/11.63)	NSSV.....................FFD.....SFV.DSSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      60.82|      21|     374|     328|     349|       3
---------------------------------------------------------------------------
  328-  347 (29.50/21.25)	...AEMRRL...R...LELKQTMD.LYSNA
  348-  365 (13.10/ 6.87)	C............reaLSAKQQVQaMELNR
  366-  388 (18.22/10.11)	CkhQEEQRLeeaR...LAEEAAM....SAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     154.09|      38|      59|     578|     616|       4
---------------------------------------------------------------------------
   99-  129 (33.49/16.99)	.RKDIHCLDIILEDTDIVK....ALTEYVSyAAIEK....
  578-  616 (56.61/37.12)	VHRDLKPGNILLDHNYVSKiSDVGLARLVP.AVAENVTQF
  640-  677 (63.99/38.05)	VKSDVYSLGILLLQLITAK.PPMGLTHYVE.RAIEKGTFF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.40|      19|     442|     303|     325|       5
---------------------------------------------------------------------------
  307-  325 (33.85/28.88)	SSVSQESG......RSSCSSQNLEE
  752-  776 (25.55/ 9.31)	SSISQEAKsdayqvENSTSSKTEEE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP00563 with Med32 domain of Kingdom Viridiplantae
Unable to open file!