<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00551
Description |
ATP-dependent DNA helicase |
Sequence | MEAEEIAEELQDVEVEIQDVEDQISALLERQEKLYERQSELTALLETCPVAVKHDSARTTVQVEDWSGPFDWDSRADDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRQGIALVVSPLLSLIQDQVMGLTASGIPAFMLTSTTNKEDEKFIYKALEKGEGDIKLLYVTPEKISKSKRFMSKLEKCYHAARLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATLKVQNDLMEMLRVPKCLKFVSTVNRPNLFYMVREKSSVGKVVIDEITEYIKESYPNNESGIVYCFSRKECEQVASELCERGISAGYYHADMDVNAREKVHMKWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLIFFRPADVPRQSSMVFYEKSGLQNLYDIVRYCQSKRQCHRGAFFQHFAEPLQECNGMCDSCAFSSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQLVDRVKNKQKQLDLKLKREELEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEVAGRSKVMDSYRKSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQISIISTKKPSSTEELEMIIGKLKTEKYGDRILGEVKKYGIAEQLNDNVLEEEQGTEKRPRKKLKTKEEVVVLTESSNDE |
Length | 709 |
Position | Unknown |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.376 |
Instability index | 42.26 |
Isoelectric point | 6.19 |
Molecular weight | 80367.24 |
Publications | PubMed=23731509
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Function
Annotated function |
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GO - Cellular Component | chromosome GO:0005694 IBA:GO_Central
cytoplasm GO:0005737 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IBA:GO_Central
ATP binding GO:0005524 IEA:UniProtKB-KW
four-way junction helicase activity GO:0009378 IBA:GO_Central
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA duplex unwinding GO:0032508 IBA:GO_Central
DNA recombination GO:0006310 IBA:GO_Central
DNA repair GO:0006281 IBA:GO_Central
DNA unwinding involved in DNA replication GO:0006268 IBA:GO_Central
double-strand break repair via homologous recombination GO:0000724 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP00551
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 130.69| 43| 154| 268| 349| 2
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268- 329 (58.28/131.11) VP.KCLKFVSTVNRPN....LFYmvrEKSSVGKVVidEIteyikesypnnesgIVYCFSRKECEQVA
408- 455 (72.41/45.99) LPsECLIFFRPADVPRqssmVFY...EKSGLQNLY..DI..............VRYCQSKRQCHRGA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 149.58| 47| 191| 355| 404| 5
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355- 404 (70.04/69.26) HMKWSKNKlQVIVGTVAFGMGINKPDVRFVIhHSLSKSMETyYQESGRAG
550- 596 (79.54/60.44) HTAYATNA.YITVGTSANQILQGKKIVKMEV.AGRSKVMDS.YRKSIKHG
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