Description | "Transcription elongation factor (TFIIS) family protein, putative isoform 1" |
Sequence | MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCDFGERSNGYQVNKEGSPNEGKGGEGGRESPFTPQSDNEDGDLDPYGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKWKEIVDEWVRVNQPGELESAALMDGDSPQQKLPQNGRQQVPDFAYSPNPHNGSFGLEKNNSEPERKPKPIPPPRKDPPPRPTHSTPPQNVQRQREQKESNFDSERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNAFFGKNKGGGSQGRHW |
Length | 337 |
Position | Unknown |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.105 |
Instability index | 54.30 |
Isoelectric point | 5.71 |
Molecular weight | 38202.91 |
Publications | PubMed=23731509 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP00537 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 102.07| 27| 89| 218| 244| 1 --------------------------------------------------------------------------- 218- 244 (51.53/27.38) QVPDFAYSPNPHNGSFGLEKNNSEPER 309- 335 (50.54/26.74) QVMDIHELPKPKNAFFGKNKGGGSQGR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KNAFFGKNK 2) KRVLEIK | 320 113 | 328 119 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab