<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00496
Description |
"U-box domain-containing protein 33, putative isoform 2" |
Sequence | MLFHQQQLRGLEEVGNDMMHRIMDDCVLFCREAGVSAEKLFIQRDDVAKGIVELIHRHNIKKLVMGAAAAEHFSERMWLMSEKAQYVNDNAPLSCQIWFICREQLVHKRFETGQSSHALSPSGSGYLTSSSEAAGILDAAVFEEREENECELDRFVLLRSGEDQDSLSMPNEGSGNDQLFDQLEQALQEAETSNRKAYEESNRRVKAEMDAVRAMRQAKAFERLYNERKRETEAALAKQKEELEKMKRQRDEEHLIAIGQKSILDSQVANSDYRIKQLEDQLSSAVEQLQISQKERDELQVELENTRKVTEELLRKQAEETSSTHMQQIYPDQLSASEIHDATLDQLQICQKEKDELQVELENTRKITDEVLRKQAEDTSSTHVQQPYAEFSLSEIQEATEDFDPSFKITEGTRGSVYYRCVLRHTDVAIKVLGQNSLQDPSEFQQEVDELSKSRHPNLVTLIGACPEIWAIIYEYLPNGSLEDRLNCRNDTPPLSSQTRINIATELCSTLMFLHSSKPQSVVHGNLKPGNILLDANFGCKLSDFGARRALSLLEDSSNARPYLDPDFRSTGRLSHSLDLYPFGIILLQLLSGRSTQGIAETAQNALQNLNSFLDSSAGNWPYQVAQLTRLAIRCCDINLSRRPDLASDVLRVLETMRVSSGATLSFLSESDEDNREPPSYFICPILQEVMDDPHVAADGYTYEASALRGWLADHDSSPMTNLRLSHRNLVPNHALRSAIREWQQPH |
Length | 747 |
Position | Tail |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
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Aromaticity | 0.06 |
Grand average of hydropathy | -0.576 |
Instability index | 50.56 |
Isoelectric point | 5.02 |
Molecular weight | 84780.90 |
Publications | PubMed=23731509
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Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:InterPro
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP00496
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 332.87| 55| 55| 288| 342| 1
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143- 186 (37.71/17.95) ......EEREEN..ECELD..RFV...LLR..SGED................QDSLSMpnegsgnDQ......LF.DQLEQA.....
190- 233 (24.68/ 9.31) ...............AETSN.RKAYEESNRRvKAEM................DAVRAM.......RQakaferLYNERKRETE....
237- 285 (24.40/ 9.13) .....AKQKEEL.............EKMKRQ.RDEEhliaigqksildsqvaNSDYRI.......KQ......L.EDQLSSA.....
288- 342 (99.11/58.61) QLQISQKERDEL..QVELENTRKVTEELLRK.QAEE................TSSTHM.......QQ......IYPDQLSASEIHDA
346- 399 (91.87/53.82) QLQICQKEKDEL..QVELENTRKITDEVLRK.QAED................TSSTHV.......QQ......PYAE.FSLSEIQEA
406- 456 (55.10/29.47) SFKITEGTRGSVyyRCVLRHT.DVAIKVLGQ.NSLQ................DPSEFQ.......QE......V..DELSKSR.H..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.72| 29| 49| 459| 489| 2
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459- 489 (46.25/41.82) LVTLIGACPEiwAIIYEYLPNGS..LEDRLNCR
511- 541 (47.48/33.97) LMFLHSSKPQ..SVVHGNLKPGNilLDANFGCK
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