Description | Mediator of RNA polymerase II transcription subunit 19 isoform 3 |
Sequence | MKDLYQKQKMEAIGNDSPGNLRTTRSANLHPPVSSCGFFSFLVVDEEELLVKFVIDSMDLESNRFGRGPKELGGAVDLIKKFKLWPHHEFFCKRPLPLSISETTYIRNVVGDTEIRKGKGMELDQLFPNASDSRGRNLSIGPFDLDLLGEAFQMRESACVDLPLAEKGIPTMVSKSKAESKDKKRKHRKQKDKEKEKDKNSKEHKHHHKDMTSDRNKNKIRHHDSGPEDLKKPQDKVCKLFPSSF |
Length | 245 |
Position | Head |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.906 |
Instability index | 41.88 |
Isoelectric point | 9.26 |
Molecular weight | 28016.74 |
Publications | PubMed=23731509 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP00492 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 50.23| 14| 14| 181| 194| 2 --------------------------------------------------------------------------- 181- 194 (24.31/12.49) KDKKRKHRKQKDKE 197- 210 (25.92/13.74) KDKNSKEHKHHHKD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) NKIRHHDSGPEDLKKPQDKVCKLFPSSF 2) RKHRKQKDKEKEKDKNSKEHKHHHKDMT | 218 185 | 245 212 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab