<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP00481
Description |
"REF4-related 1, putative isoform 2" |
Sequence | MAVSIQAASPVWESVLEQTKSAQGKNSDPLLWAVQLSSSLNSAGVSLPSIDLAHLLVSHICWDNHVPITWKYLEKAMTVKFVPPILVLALLSTRVIPNRKFHPAAYRLYMELLRRHTFSLKCQINKPNYQKTMKSIDDVLHLSQIFGLQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEKRSIWPTITQDMEIDTPDNFNEKRNEQLDVMYKGNTTMAIEIIGEFLQNKVTSRILFLARRNMPSHWGAFIQQLSILAAQSVALRNSKHLTPDALLQLTSDSRKVLSRECKIKSHEEFHAIIGSGCLTSSSGQCYGTSSSAHWLPIDLFLEDAMDGSQVAATGAVERLTGLVKALQAVNGTTWHDTFLGLWIAALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDESDCSPTNQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAAKAIMFISGLTVGNGYYECMSINDMPMNCSGNMRHLIVEACIARNLLDTSAYIWPGYVNARANIPCSVPSQVPGWSSLMKGSPLTPTLINALIATPASSLAEIEKIYEIATKGSDEEKISAASILCGASLVRGWNIQEHNILFITSLLSPPVPADYSGSDSHLINYAPLLNVLLVGISSVDCVQIFSLHGMVPLLAGTLMPLCEVFGSTAPTVSWTLPTGEELTSHAVFTNAFTLLLRLWRFDHPPLERVMGDATPVGSQLSPDYLLLVRNSKLLAFGKSPKDRLKIKRLSKNLNFSLDIIFMDSFPKLKCWYRQHQECIASTLSGLVQGTTVHQIVDALLNMMFRKISRGGQSFTSTTSGSSSSSASGAEDAHTRLKVPAWDILEGTPYVLDAALTACAHGRLSPRELATGLKDLADFLPATLGTIVSYFSAEVTRGIWKPAFMNGTDWPSPAANLSMVEQHIKKILAATGVDVPSLAVGITLYHYICSLP |
Length | 967 |
Position | Tail |
Organism | Theobroma cacao (Cacao) (Cocoa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Byttnerioideae> Theobroma.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.082 |
Instability index | 44.11 |
Isoelectric point | 6.08 |
Molecular weight | 106085.23 |
Publications | PubMed=23731509
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP00481
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 186.50| 68| 337| 255| 393| 1
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173- 253 (102.24/92.20) LDDEGLLELTPEKRSIwptITQDMEIDT..............................P.DNFNEKRNEQLDVMYKGnttmAIE.IIG..EFLQ..NKVTSRILFLarrnmpSHWGA
274- 377 (84.26/150.95) LTPDALLQLTSDSRKV...LSRECKIKSheefhaiigsgcltsssgqcygtsssahwlPiDLFLEDAMDGSQVAATG....AVErLTGlvKALQavNGTTWHDTFL......GLWIA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 98.33| 32| 336| 518| 590| 2
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396- 431 (51.51/14.10) LDTClcmlLSITPLVV...ANI...VEEE...ESELIDESDCSPT
522- 562 (46.83/67.47) LDTS....AYIWPGYVnarANIpcsVPSQvpgWSSLMKGSPLTPT
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